Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LIM2P55344 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 OR8X1P-201ENST00000534542 869 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 AC069061.3-201ENST00000582254 823 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.29□□□□□ -1.72
LIM2P55344 SLC25A36P1-201ENST00000590111 465 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC073111.2-201ENST00000605657 1075 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC034236.3-201ENST00000605999 461 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC015802.5-201ENST00000607478 399 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC135803.1-201ENST00000608748 565 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AC100847.1-201ENST00000611316 481 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AL133243.1-201ENST00000614487 366 ntBASIC4.29□□□□□ -1.72
LIM2P55344 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LIM2P55344 AC006840.1-201ENST00000623069 542 ntBASIC4.29□□□□□ -1.72
LIM2P55344 AL049536.1-201ENST00000625043 744 ntBASIC4.29□□□□□ -1.72
LIM2P55344 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
LIM2P55344 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIM2P55344 AC083843.3-201ENST00000623679 2186 ntBASIC4.29□□□□□ -1.72
LIM2P55344 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
LIM2P55344 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
LIM2P55344 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.72
LIM2P55344 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIM2P55344 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LIM2P55344 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIM2P55344 MIR192-201ENST00000384915 110 ntBASIC4.28□□□□□ -1.72
LIM2P55344 GLULP6-201ENST00000399502 913 ntBASIC4.28□□□□□ -1.72
LIM2P55344 FCF1P5-201ENST00000406490 482 ntBASIC4.28□□□□□ -1.72
LIM2P55344 MTND3P20-201ENST00000407663 186 ntBASIC4.28□□□□□ -1.72
LIM2P55344 RPL37P18-201ENST00000411602 243 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.28□□□□□ -1.72
LIM2P55344 AC006065.1-201ENST00000422539 802 ntBASIC4.28□□□□□ -1.72
LIM2P55344 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
LIM2P55344 ARL2BPP10-201ENST00000446487 531 ntBASIC4.28□□□□□ -1.72
LIM2P55344 MTND2P3-201ENST00000452458 470 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
LIM2P55344 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.28□□□□□ -1.72
LIM2P55344 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LIM2P55344 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.28□□□□□ -1.72
LIM2P55344 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.28□□□□□ -1.72
LIM2P55344 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.28□□□□□ -1.72
LIM2P55344 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LIM2P55344 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.28□□□□□ -1.72
LIM2P55344 AC016550.3-201ENST00000515706 767 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC067904.2-201ENST00000517322 1283 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC109635.6-201ENST00000525487 1113 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.28□□□□□ -1.72
LIM2P55344 OR5AN2P-201ENST00000534535 896 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC087888.1-201ENST00000550884 1254 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.28□□□□□ -1.72
LIM2P55344 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.28□□□□□ -1.72
LIM2P55344 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.28□□□□□ -1.72
LIM2P55344 AC027455.1-201ENST00000574104 594 ntBASIC4.28□□□□□ -1.72
LIM2P55344 MIR4675-201ENST00000577898 77 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.28□□□□□ -1.72
LIM2P55344 RPL7P50-201ENST00000600588 727 ntBASIC4.28□□□□□ -1.72
LIM2P55344 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.28□□□□□ -1.72
LIM2P55344 LINC01808-202ENST00000641680 1116 ntBASIC4.28□□□□□ -1.72
LIM2P55344 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.28□□□□□ -1.72
LIM2P55344 AC139713.2-215ENST00000641428 5037 ntBASIC4.28□□□□□ -1.72
LIM2P55344 MAPK10-320ENST00000641462 6696 ntBASIC4.28□□□□□ -1.72
LIM2P55344 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
LIM2P55344 LINC00622-201ENST00000562811 1570 ntBASIC4.27□□□□□ -1.73
LIM2P55344 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.27□□□□□ -1.73
LIM2P55344 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.27□□□□□ -1.73
LIM2P55344 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
LIM2P55344 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 AL589826.1-201ENST00000340697 249 ntBASIC4.27□□□□□ -1.73
LIM2P55344 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.27□□□□□ -1.73
LIM2P55344 RNU6-883P-201ENST00000384597 107 ntBASIC4.27□□□□□ -1.73
LIM2P55344 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIM2P55344 RPS3AP23-201ENST00000401762 784 ntBASIC4.27□□□□□ -1.73
LIM2P55344 HDGFP1-201ENST00000405943 252 ntBASIC4.27□□□□□ -1.73
LIM2P55344 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
LIM2P55344 RPL23AP4-201ENST00000427757 463 ntBASIC4.27□□□□□ -1.73
LIM2P55344 AP001324.1-201ENST00000428553 399 ntBASIC4.27□□□□□ -1.73
LIM2P55344 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.27□□□□□ -1.73
LIM2P55344 RSL24D1P8-201ENST00000434442 492 ntBASIC4.27□□□□□ -1.73
LIM2P55344 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.27□□□□□ -1.73
LIM2P55344 RPS23P1-201ENST00000491662 432 ntBASIC4.27□□□□□ -1.73
LIM2P55344 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.27□□□□□ -1.73
LIM2P55344 IGHV3-63-201ENST00000518422 341 ntBASIC4.27□□□□□ -1.73
LIM2P55344 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.27□□□□□ -1.73
LIM2P55344 OR10D4P-201ENST00000525892 951 ntBASIC4.27□□□□□ -1.73
LIM2P55344 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms