Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS2P54868 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGCS2P54868 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HMGCS2P54868 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMGCS2P54868 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS2P54868 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS2P54868 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS2P54868 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGCS2P54868 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGCS2P54868 MIR133A2-201ENST00000347538 102 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 MT-RNR1-201ENST00000389680 954 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AL356968.2-201ENST00000412769 1257 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 OR13Z1P-201ENST00000416141 834 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 FTLP19-201ENST00000433300 394 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS2P54868 Z95327.1-201ENST00000446082 482 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 RPS20P4-201ENST00000461659 355 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AC090602.1-201ENST00000469695 252 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AK4P6-201ENST00000505168 528 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGCS2P54868 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
HMGCS2P54868 RNU6-751P-201ENST00000516382 101 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 RNA5SP519-201ENST00000516480 119 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS2P54868 MIR4429-201ENST00000580105 73 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AC006116.5-201ENST00000591936 559 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AC005520.3-201ENST00000602874 370 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 NF1P10-201ENST00000613227 742 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AL445363.3-201ENST00000623080 671 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 AC034229.5-201ENST00000624258 185 ntBASIC5.07□□□□□ -1.6
HMGCS2P54868 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGCS2P54868 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGCS2P54868 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS2P54868 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC097374.1-203ENST00000400783 485 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 RNA5SP36-201ENST00000410197 133 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 RFESDP1-201ENST00000422350 461 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 AL389915.1-201ENST00000422463 466 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 RNU6-775P-201ENST00000459318 96 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 AC020890.1-201ENST00000491837 504 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 RN7SL812P-201ENST00000493791 279 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC091178.1-203ENST00000584586 279 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC245389.1-201ENST00000605141 529 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AC073869.7-201ENST00000640874 297 ntBASIC5.06□□□□□ -1.6
HMGCS2P54868 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGCS2P54868 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGCS2P54868 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGCS2P54868 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HMGCS2P54868 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 DHX9P1-201ENST00000436565 3076 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 AC007342.9-201ENST00000623877 1385 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS2P54868 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS2P54868 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS2P54868 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGCS2P54868 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGCS2P54868 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGCS2P54868 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
HMGCS2P54868 RNU1-63P-201ENST00000383902 164 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 EI24P3-201ENST00000399046 1062 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 AL592291.1-201ENST00000403830 352 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 RN7SKP235-201ENST00000410662 305 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 RNU2-22P-201ENST00000411266 212 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 OR8G2P-201ENST00000412796 908 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 AC009237.10-201ENST00000414112 510 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGCS2P54868 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGCS2P54868 AL034379.1-201ENST00000423216 253 ntBASIC5.05□□□□□ -1.6
HMGCS2P54868 AL157831.1-201ENST00000426134 473 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms