Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC009163.6-201ENST00000612367 342 ntBASIC5.55□□□□□ -1.52
NEK3P51956 FRG1EP-201ENST00000634469 770 ntBASIC5.55□□□□□ -1.52
NEK3P51956 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NEK3P51956 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 AL031119.1-201ENST00000404707 1879 ntBASIC5.54□□□□□ -1.52
NEK3P51956 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AL078621.3-201ENST00000623707 2042 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AL138820.1-201ENST00000617901 5305 ntBASIC5.54□□□□□ -1.52
NEK3P51956 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.54□□□□□ -1.52
NEK3P51956 OR9K1P-201ENST00000326513 941 ntBASIC5.54□□□□□ -1.52
NEK3P51956 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEK3P51956 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 RNU1-77P-201ENST00000390868 162 ntBASIC5.54□□□□□ -1.52
NEK3P51956 MIR1178-201ENST00000408396 91 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AC007161.1-204ENST00000423039 460 ntBASIC5.54□□□□□ -1.52
NEK3P51956 MTCO2P17-201ENST00000424336 677 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 HMGB1P48-201ENST00000446155 598 ntBASIC5.54□□□□□ -1.52
NEK3P51956 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 AC105399.1-202ENST00000447303 205 ntBASIC5.54□□□□□ -1.52
NEK3P51956 MYO5BP2-201ENST00000449815 1277 ntBASIC5.54□□□□□ -1.52
NEK3P51956 ZNF886P-201ENST00000450781 723 ntBASIC5.54□□□□□ -1.52
NEK3P51956 OR52E3P-201ENST00000452083 936 ntBASIC5.54□□□□□ -1.52
NEK3P51956 SNORD11.1-201ENST00000459482 85 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.54□□□□□ -1.52
NEK3P51956 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 RN7SL447P-201ENST00000494711 245 ntBASIC5.54□□□□□ -1.52
NEK3P51956 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.54□□□□□ -1.52
NEK3P51956 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 RNA5SP34-201ENST00000516887 130 ntBASIC5.54□□□□□ -1.52
NEK3P51956 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 OR7E128P-201ENST00000532736 1024 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 SERPINE4P-201ENST00000554978 281 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AC044913.1-201ENST00000557200 430 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.54□□□□□ -1.52
NEK3P51956 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 AC093765.1-201ENST00000603758 881 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AL392112.1-201ENST00000605115 829 ntBASIC5.54□□□□□ -1.52
NEK3P51956 AL121895.2-201ENST00000619558 447 ntBASIC5.54□□□□□ -1.52
NEK3P51956 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEK3P51956 CYP1D1P-201ENST00000416662 1433 ntBASIC5.54□□□□□ -1.52
NEK3P51956 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.54□□□□□ -1.52
NEK3P51956 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEK3P51956 SOCS5P3-201ENST00000425115 1576 ntBASIC5.54□□□□□ -1.52
NEK3P51956 OR55B1P-203ENST00000641518 2602 ntBASIC5.54□□□□□ -1.52
NEK3P51956 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEK3P51956 DBF4P1-201ENST00000412976 1892 ntBASIC5.54□□□□□ -1.52
NEK3P51956 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NEK3P51956 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
NEK3P51956 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.53□□□□□ -1.52
NEK3P51956 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NEK3P51956 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.53□□□□□ -1.52
NEK3P51956 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.53□□□□□ -1.52
NEK3P51956 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.53□□□□□ -1.52
NEK3P51956 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 ZNF29P-201ENST00000225587 168 ntBASIC5.53□□□□□ -1.52
NEK3P51956 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NEK3P51956 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NEK3P51956 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
NEK3P51956 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
NEK3P51956 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEK3P51956 RNA5SP296-201ENST00000410523 111 ntBASIC5.53□□□□□ -1.52
NEK3P51956 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.53□□□□□ -1.52
NEK3P51956 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.53□□□□□ -1.52
NEK3P51956 AC092648.1-201ENST00000425870 423 ntBASIC5.53□□□□□ -1.52
NEK3P51956 IPMKP1-201ENST00000425988 855 ntBASIC5.53□□□□□ -1.52
NEK3P51956 C1DP1-201ENST00000426049 402 ntBASIC5.53□□□□□ -1.52
NEK3P51956 HSPD1P12-201ENST00000429127 1069 ntBASIC5.53□□□□□ -1.52
NEK3P51956 RPL7AP49-201ENST00000429522 581 ntBASIC5.53□□□□□ -1.52
NEK3P51956 FAM96AP1-201ENST00000430879 482 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms