Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL355615.1-201ENST00000406187 641 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 U3.32-201ENST00000408116 212 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.9□□□□□ -1.63
CLCNKAP51800 COX6B1P1-201ENST00000415962 213 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AF186996.5-201ENST00000418098 904 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 OR2AM1P-201ENST00000422137 422 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 OR5M12P-201ENST00000423388 929 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 MTCO2P23-201ENST00000425216 680 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLCNKAP51800 MTCO1P43-201ENST00000431831 488 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 PRPF38AP2-201ENST00000438179 851 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 TXNP5-201ENST00000441043 315 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCNKAP51800 RPL7P33-201ENST00000444159 742 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 HMGB1P5-202ENST00000451497 985 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 HMGB1P26-201ENST00000452520 628 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC107398.1-201ENST00000486904 505 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC010374.1-201ENST00000503762 1237 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC069306.1-201ENST00000507006 843 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC010476.1-201ENST00000519111 851 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 BRD9P1-201ENST00000529855 560 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AP000916.1-201ENST00000533869 835 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC087894.1-201ENST00000538359 518 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.9□□□□□ -1.63
CLCNKAP51800 BGLT3-201ENST00000564523 994 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 MIR4436B2-201ENST00000581415 91 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC233702.9-201ENST00000581528 203 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCNKAP51800 MIR4436B1-201ENST00000583272 91 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 SUMO2P14-201ENST00000604488 293 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AC005377.1-201ENST00000605126 456 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AL512427.1-201ENST00000618593 349 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.9□□□□□ -1.63
CLCNKAP51800 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC008993.2-201ENST00000631744 806 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLCNKAP51800 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLCNKAP51800 AC053481.2-202ENST00000582394 1500 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLCNKAP51800 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.63
CLCNKAP51800 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCNKAP51800 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 AC007382.1-201ENST00000624376 2618 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCNKAP51800 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 RNU6-468P-201ENST00000384003 109 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 MT-TP-201ENST00000387461 68 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 HMGB1P10-201ENST00000395823 563 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 ATF1P1-201ENST00000406040 927 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL512430.2-201ENST00000406786 339 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC096533.1-201ENST00000411645 353 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL590806.1-201ENST00000415818 853 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 TCEA1P2-201ENST00000420496 906 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL590609.2-201ENST00000421430 368 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 RPL34P6-201ENST00000432390 345 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCNKAP51800 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 RPS27P5-201ENST00000444247 244 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCNKAP51800 CASP3P1-201ENST00000446037 609 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCNKAP51800 HMGB1P4-201ENST00000455362 567 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCNKAP51800 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCNKAP51800 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCNKAP51800 RPS3AP41-201ENST00000462701 778 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 AC096741.1-201ENST00000472250 846 ntBASIC4.89□□□□□ -1.63
CLCNKAP51800 RPL21P47-201ENST00000483696 477 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms