Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 HMGB1P44-201ENST00000508597 572 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.26□□□□□ -1.73
CDX1P47902 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 SCARNA16.4-201ENST00000516956 187 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.26□□□□□ -1.73
CDX1P47902 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.26□□□□□ -1.73
CDX1P47902 MTND5P21-201ENST00000531961 522 ntBASIC4.26□□□□□ -1.73
CDX1P47902 OR5AM1P-201ENST00000532136 1032 ntBASIC4.26□□□□□ -1.73
CDX1P47902 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.26□□□□□ -1.73
CDX1P47902 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.26□□□□□ -1.73
CDX1P47902 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.26□□□□□ -1.73
CDX1P47902 AC004825.1-201ENST00000555068 586 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.26□□□□□ -1.73
CDX1P47902 AC023825.1-201ENST00000566704 1030 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC023824.3-201ENST00000569003 562 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC090666.1-201ENST00000578241 445 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AP000919.1-202ENST00000581139 1264 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC011840.5-201ENST00000582125 771 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC011477.5-201ENST00000586571 259 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC008507.2-201ENST00000588402 1176 ntBASIC4.26□□□□□ -1.73
CDX1P47902 RNF138P2-201ENST00000603490 592 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC000068.2-201ENST00000608816 460 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.26□□□□□ -1.73
CDX1P47902 AC124016.2-201ENST00000610058 665 ntBASIC4.26□□□□□ -1.73
CDX1P47902 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 AC008115.4-201ENST00000619780 775 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AL049777.1-201ENST00000622740 518 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC010872.1-201ENST00000624225 675 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AL590396.4-201ENST00000636779 956 ntBASIC4.26□□□□□ -1.73
CDX1P47902 LINC01808-202ENST00000641680 1116 ntBASIC4.26□□□□□ -1.73
CDX1P47902 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.26□□□□□ -1.73
CDX1P47902 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.26□□□□□ -1.73
CDX1P47902 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CDX1P47902 AL049737.1-201ENST00000413920 1403 ntBASIC4.26□□□□□ -1.73
CDX1P47902 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.26□□□□□ -1.73
CDX1P47902 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.26□□□□□ -1.73
CDX1P47902 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDX1P47902 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDX1P47902 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDX1P47902 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.26□□□□□ -1.73
CDX1P47902 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.25□□□□□ -1.73
CDX1P47902 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.25□□□□□ -1.73
CDX1P47902 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 AC234772.1-201ENST00000377927 937 ntBASIC4.25□□□□□ -1.73
CDX1P47902 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.25□□□□□ -1.73
CDX1P47902 AL121834.1-202ENST00000404494 277 ntBASIC4.25□□□□□ -1.73
CDX1P47902 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.25□□□□□ -1.73
CDX1P47902 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.25□□□□□ -1.73
CDX1P47902 E2F6P2-201ENST00000420708 748 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AL133325.1-201ENST00000421090 382 ntBASIC4.25□□□□□ -1.73
CDX1P47902 RPL7P56-201ENST00000429441 717 ntBASIC4.25□□□□□ -1.73
CDX1P47902 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 AC011242.1-201ENST00000433596 1158 ntBASIC4.25□□□□□ -1.73
CDX1P47902 FABP5P3-201ENST00000437960 408 ntBASIC4.25□□□□□ -1.73
CDX1P47902 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.25□□□□□ -1.73
CDX1P47902 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.25□□□□□ -1.73
CDX1P47902 Z95152.1-201ENST00000453556 656 ntBASIC4.25□□□□□ -1.73
CDX1P47902 CYCSP34-201ENST00000458172 304 ntBASIC4.25□□□□□ -1.73
CDX1P47902 COPS8P2-201ENST00000473228 627 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.25□□□□□ -1.73
CDX1P47902 RPS21P4-201ENST00000487122 248 ntBASIC4.25□□□□□ -1.73
CDX1P47902 RN7SL30P-201ENST00000488416 306 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC023050.1-201ENST00000498198 304 ntBASIC4.25□□□□□ -1.73
CDX1P47902 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.25□□□□□ -1.73
CDX1P47902 MTND6P2-201ENST00000512226 524 ntBASIC4.25□□□□□ -1.73
CDX1P47902 RNA5SP34-201ENST00000516887 130 ntBASIC4.25□□□□□ -1.73
CDX1P47902 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.25□□□□□ -1.73
CDX1P47902 DYNLL1P4-201ENST00000549314 266 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.25□□□□□ -1.73
CDX1P47902 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.25□□□□□ -1.73
CDX1P47902 BLZF2P-201ENST00000553776 1130 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AL442163.2-201ENST00000553912 710 ntBASIC4.25□□□□□ -1.73
CDX1P47902 OR4U1P-201ENST00000554958 912 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 AC090515.3-201ENST00000560431 315 ntBASIC4.25□□□□□ -1.73
CDX1P47902 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.25□□□□□ -1.73
CDX1P47902 AL512329.2-201ENST00000607350 548 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.25□□□□□ -1.73
CDX1P47902 AL121890.3-201ENST00000618494 516 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.25□□□□□ -1.73
CDX1P47902 BX005214.3-202ENST00000619809 325 ntBASIC4.25□□□□□ -1.73
CDX1P47902 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.25□□□□□ -1.73
CDX1P47902 AC015804.1-201ENST00000622935 435 ntBASIC4.25□□□□□ -1.73
CDX1P47902 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 TLK1P1-201ENST00000456760 2440 ntBASIC4.25□□□□□ -1.73
CDX1P47902 NSRP1P1-201ENST00000444067 1693 ntBASIC4.25□□□□□ -1.73
CDX1P47902 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms