Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 GTF2H2B-203ENST00000508065 1432 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD12P35452 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD12P35452 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD12P35452 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 RN7SKP185-201ENST00000362813 326 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 TAS2R15P-201ENST00000390674 928 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AL078599.1-201ENST00000402075 293 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AL590290.1-201ENST00000405336 380 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC019050.1-201ENST00000418508 492 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 OSTCP5-201ENST00000425293 453 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 AL049745.1-201ENST00000433953 286 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 AL358794.1-201ENST00000445689 381 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 RPL31P44-201ENST00000447680 377 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 TPMTP4-201ENST00000450749 678 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC096992.1-201ENST00000459808 709 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 RPS3AP41-201ENST00000462701 778 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD12P35452 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
HOXD12P35452 HPRT1P1-201ENST00000509498 657 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 SNORA31.13-201ENST00000516624 135 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD12P35452 OR10V3P-201ENST00000525712 725 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD12P35452 AP003717.3-201ENST00000544832 1180 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD12P35452 HIRAP1-201ENST00000605318 787 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 Z99289.3-201ENST00000605586 594 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AC106052.1-201ENST00000608029 497 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC243654.2-201ENST00000612843 443 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 Z99129.2-201ENST00000619967 314 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 AC004232.3-201ENST00000622977 525 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD12P35452 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 CYP4F35P-202ENST00000636121 390 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC012618.3-205ENST00000637896 1496 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD12P35452 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD12P35452 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXD12P35452 ASNSP1-201ENST00000518311 1939 ntBASIC5.36□□□□□ -1.55
HOXD12P35452 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD12P35452 AC026951.1-201ENST00000559530 2459 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXD12P35452 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXD12P35452 AC114546.3-201ENST00000623582 1734 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD12P35452 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD12P35452 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD12P35452 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD12P35452 AL603865.2-201ENST00000401679 213 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 RN7SKP126-201ENST00000411143 300 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 LINC01881-201ENST00000416103 412 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 RPL12P34-201ENST00000424532 479 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 RPL12P28-201ENST00000430852 489 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXD12P35452 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD12P35452 Z80107.2-201ENST00000445127 392 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 AZGP1P2-201ENST00000454506 345 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 GYG1P1-201ENST00000460864 698 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 AC092324.1-201ENST00000468671 324 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD12P35452 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD12P35452 AC112673.1-201ENST00000513168 575 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 RNU6-311P-201ENST00000516224 102 ntBASIC5.35□□□□□ -1.55
HOXD12P35452 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXD12P35452 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms