Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP6P35125 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.8□□□□□ -1.48
USP6P35125 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP6P35125 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP6P35125 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP6P35125 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.79□□□□□ -1.48
USP6P35125 AP000432.2-201ENST00000624164 2048 ntBASIC5.79□□□□□ -1.48
USP6P35125 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP6P35125 VPS35P1-201ENST00000563400 1518 ntBASIC5.79□□□□□ -1.48
USP6P35125 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.79□□□□□ -1.48
USP6P35125 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP6P35125 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
USP6P35125 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP6P35125 RN7SKP159-201ENST00000410657 292 ntBASIC5.79□□□□□ -1.48
USP6P35125 ARAFP2-201ENST00000440565 559 ntBASIC5.79□□□□□ -1.48
USP6P35125 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.79□□□□□ -1.48
USP6P35125 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.79□□□□□ -1.48
USP6P35125 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.79□□□□□ -1.48
USP6P35125 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.79□□□□□ -1.48
USP6P35125 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.79□□□□□ -1.48
USP6P35125 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.79□□□□□ -1.48
USP6P35125 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.79□□□□□ -1.48
USP6P35125 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP6P35125 AC105036.1-201ENST00000566222 271 ntBASIC5.79□□□□□ -1.48
USP6P35125 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.79□□□□□ -1.48
USP6P35125 AL049840.6-202ENST00000603373 279 ntBASIC5.79□□□□□ -1.48
USP6P35125 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.79□□□□□ -1.48
USP6P35125 AC039056.2-201ENST00000622261 511 ntBASIC5.79□□□□□ -1.48
USP6P35125 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
USP6P35125 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP6P35125 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP6P35125 AL731532.2-201ENST00000623542 1953 ntBASIC5.79□□□□□ -1.48
USP6P35125 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
USP6P35125 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP6P35125 MAPK10-286ENST00000641208 8747 ntBASIC5.79□□□□□ -1.48
USP6P35125 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
USP6P35125 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.78□□□□□ -1.48
USP6P35125 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP6P35125 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
USP6P35125 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP6P35125 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP6P35125 AL358178.1-201ENST00000407698 397 ntBASIC5.78□□□□□ -1.48
USP6P35125 EIF4A1P1-201ENST00000420241 934 ntBASIC5.78□□□□□ -1.48
USP6P35125 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP6P35125 AC108751.2-201ENST00000469993 231 ntBASIC5.78□□□□□ -1.48
USP6P35125 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.78□□□□□ -1.48
USP6P35125 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.78□□□□□ -1.48
USP6P35125 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.78□□□□□ -1.48
USP6P35125 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.78□□□□□ -1.48
USP6P35125 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.78□□□□□ -1.48
USP6P35125 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
USP6P35125 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
USP6P35125 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.77□□□□□ -1.49
USP6P35125 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
USP6P35125 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.77□□□□□ -1.49
USP6P35125 PTMAP2-201ENST00000397627 327 ntBASIC5.77□□□□□ -1.49
USP6P35125 AC108032.1-201ENST00000416706 207 ntBASIC5.77□□□□□ -1.49
USP6P35125 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.77□□□□□ -1.49
USP6P35125 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.77□□□□□ -1.49
USP6P35125 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 RPL7P22-201ENST00000466005 733 ntBASIC5.77□□□□□ -1.49
USP6P35125 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.77□□□□□ -1.49
USP6P35125 OR4A2P-201ENST00000527276 913 ntBASIC5.77□□□□□ -1.49
USP6P35125 AC006064.5-201ENST00000541782 248 ntBASIC5.77□□□□□ -1.49
USP6P35125 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.77□□□□□ -1.49
USP6P35125 AP003400.2-201ENST00000624036 666 ntBASIC5.77□□□□□ -1.49
USP6P35125 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.77□□□□□ -1.49
USP6P35125 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.77□□□□□ -1.49
USP6P35125 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP6P35125 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP6P35125 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
USP6P35125 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP6P35125 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.76□□□□□ -1.49
USP6P35125 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP6P35125 SNORD46.1-201ENST00000364139 104 ntBASIC5.76□□□□□ -1.49
USP6P35125 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.76□□□□□ -1.49
USP6P35125 AP000357.1-201ENST00000409926 1165 ntBASIC5.76□□□□□ -1.49
USP6P35125 MIR1911-201ENST00000410783 80 ntBASIC5.76□□□□□ -1.49
USP6P35125 OR8F1P-201ENST00000425243 930 ntBASIC5.76□□□□□ -1.49
USP6P35125 RPL7P2-201ENST00000427639 268 ntBASIC5.76□□□□□ -1.49
USP6P35125 CEACAMP1-201ENST00000434624 1035 ntBASIC5.76□□□□□ -1.49
USP6P35125 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.76□□□□□ -1.49
USP6P35125 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.76□□□□□ -1.49
USP6P35125 ATP5G1P3-201ENST00000463301 410 ntBASIC5.76□□□□□ -1.49
USP6P35125 AF213884.1-201ENST00000488102 463 ntBASIC5.76□□□□□ -1.49
USP6P35125 AC146944.2-203ENST00000502493 354 ntBASIC5.76□□□□□ -1.49
USP6P35125 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
USP6P35125 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
USP6P35125 NPM1P41-201ENST00000512920 831 ntBASIC5.76□□□□□ -1.49
USP6P35125 AC139495.1-202ENST00000513164 354 ntBASIC5.76□□□□□ -1.49
USP6P35125 OR5D2P-201ENST00000524390 911 ntBASIC5.76□□□□□ -1.49
USP6P35125 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.76□□□□□ -1.49
USP6P35125 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP6P35125 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms