Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.47□□□□□ -1.53
CIITAP33076 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.47□□□□□ -1.53
CIITAP33076 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.47□□□□□ -1.53
CIITAP33076 AC116651.1-201ENST00000609724 556 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AP003476.1-201ENST00000623984 516 ntBASIC5.47□□□□□ -1.53
CIITAP33076 AL603750.1-201ENST00000624216 1717 ntBASIC5.47□□□□□ -1.53
CIITAP33076 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 TLK1P1-201ENST00000456760 2440 ntBASIC5.47□□□□□ -1.53
CIITAP33076 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 AC133552.1-201ENST00000569988 4007 ntBASIC5.47□□□□□ -1.53
CIITAP33076 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CIITAP33076 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CIITAP33076 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.47□□□□□ -1.53
CIITAP33076 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.53
CIITAP33076 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CIITAP33076 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.46□□□□□ -1.53
CIITAP33076 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.46□□□□□ -1.53
CIITAP33076 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.46□□□□□ -1.53
CIITAP33076 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CIITAP33076 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CIITAP33076 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CIITAP33076 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CIITAP33076 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CIITAP33076 RPL22P22-201ENST00000395439 379 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AL035419.1-201ENST00000397037 564 ntBASIC5.46□□□□□ -1.54
CIITAP33076 VN1R51P-201ENST00000411675 945 ntBASIC5.46□□□□□ -1.54
CIITAP33076 RSU1P3-201ENST00000412878 835 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AL139128.1-201ENST00000413921 941 ntBASIC5.46□□□□□ -1.54
CIITAP33076 BX510359.2-201ENST00000417920 305 ntBASIC5.46□□□□□ -1.54
CIITAP33076 TMBIM7P-201ENST00000418074 855 ntBASIC5.46□□□□□ -1.54
CIITAP33076 TCEA1P2-201ENST00000420496 906 ntBASIC5.46□□□□□ -1.54
CIITAP33076 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 RPS17P8-201ENST00000434525 335 ntBASIC5.46□□□□□ -1.54
CIITAP33076 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 OR1H1P-201ENST00000448731 937 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AL133244.1-201ENST00000456007 258 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC104164.3-201ENST00000467363 1258 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC011005.3-201ENST00000491624 395 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC104971.1-201ENST00000495117 578 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC098862.1-201ENST00000504991 413 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.46□□□□□ -1.54
CIITAP33076 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CIITAP33076 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 AP006245.2-201ENST00000522004 300 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.46□□□□□ -1.54
CIITAP33076 AC004923.2-201ENST00000529649 369 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 AP001880.2-201ENST00000538233 448 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.46□□□□□ -1.54
CIITAP33076 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.46□□□□□ -1.54
CIITAP33076 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.46□□□□□ -1.54
CIITAP33076 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.46□□□□□ -1.54
CIITAP33076 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.46□□□□□ -1.54
CIITAP33076 AC069431.2-201ENST00000604149 1099 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC026741.1-201ENST00000605892 482 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC112503.1-201ENST00000608436 391 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AP005229.2-201ENST00000609980 697 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC004908.3-201ENST00000610248 625 ntBASIC5.46□□□□□ -1.54
CIITAP33076 AC090617.9-201ENST00000623751 147 ntBASIC5.46□□□□□ -1.54
CIITAP33076 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CIITAP33076 AC073429.2-201ENST00000569694 1444 ntBASIC5.46□□□□□ -1.54
CIITAP33076 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CIITAP33076 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
CIITAP33076 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CIITAP33076 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 ZFRP1-201ENST00000457579 2970 ntBASIC5.45□□□□□ -1.54
CIITAP33076 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 AC053481.2-202ENST00000582394 1500 ntBASIC5.45□□□□□ -1.54
CIITAP33076 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 MT-TP-201ENST00000387461 68 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.45□□□□□ -1.54
CIITAP33076 HMGB3P5-201ENST00000428894 612 ntBASIC5.45□□□□□ -1.54
CIITAP33076 OR2B7P-201ENST00000429302 934 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AL451139.1-201ENST00000434718 346 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC005154.2-201ENST00000438110 379 ntBASIC5.45□□□□□ -1.54
CIITAP33076 TCEA1P3-201ENST00000443005 880 ntBASIC5.45□□□□□ -1.54
CIITAP33076 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 GYG1P1-201ENST00000460864 698 ntBASIC5.45□□□□□ -1.54
CIITAP33076 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.45□□□□□ -1.54
CIITAP33076 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.45□□□□□ -1.54
CIITAP33076 AC069306.1-201ENST00000507006 843 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.45□□□□□ -1.54
CIITAP33076 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.45□□□□□ -1.54
CIITAP33076 AL671862.1-201ENST00000515851 349 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.45□□□□□ -1.54
CIITAP33076 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.45□□□□□ -1.54
CIITAP33076 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.45□□□□□ -1.54
CIITAP33076 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms