Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.24□□□□□ -1.25
RXRBP28702 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC7.24□□□□□ -1.25
RXRBP28702 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RXRBP28702 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.24□□□□□ -1.25
RXRBP28702 VN1R83P-201ENST00000595685 445 ntBASIC7.24□□□□□ -1.25
RXRBP28702 VN1R92P-201ENST00000598511 928 ntBASIC7.24□□□□□ -1.25
RXRBP28702 AC090181.2-201ENST00000602975 672 ntBASIC7.24□□□□□ -1.25
RXRBP28702 ELOCP34-201ENST00000604436 327 ntBASIC7.24□□□□□ -1.25
RXRBP28702 AL391358.1-201ENST00000605342 190 ntBASIC7.24□□□□□ -1.25
RXRBP28702 RNU4-89P-201ENST00000607443 133 ntBASIC7.24□□□□□ -1.25
RXRBP28702 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.24□□□□□ -1.25
RXRBP28702 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RXRBP28702 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.24□□□□□ -1.25
RXRBP28702 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RXRBP28702 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 AC018809.2-201ENST00000602436 3823 ntBASIC7.23□□□□□ -1.25
RXRBP28702 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.23□□□□□ -1.25
RXRBP28702 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.23□□□□□ -1.25
RXRBP28702 TNPO1P2-201ENST00000426249 2665 ntBASIC7.23□□□□□ -1.25
RXRBP28702 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RXRBP28702 AL359837.1-201ENST00000381357 287 ntBASIC7.23□□□□□ -1.25
RXRBP28702 RNU6-157P-201ENST00000383957 107 ntBASIC7.23□□□□□ -1.25
RXRBP28702 Y_RNA.578-201ENST00000390903 88 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AL590084.2-201ENST00000401481 382 ntBASIC7.23□□□□□ -1.25
RXRBP28702 OR4K12P-201ENST00000406538 961 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 RPL7P57-201ENST00000423238 740 ntBASIC7.23□□□□□ -1.25
RXRBP28702 YWHAZP7-201ENST00000436906 631 ntBASIC7.23□□□□□ -1.25
RXRBP28702 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.23□□□□□ -1.25
RXRBP28702 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 AC063943.1-201ENST00000465434 453 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.23□□□□□ -1.25
RXRBP28702 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.23□□□□□ -1.25
RXRBP28702 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 AC009101.1-201ENST00000568135 242 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 MIR4789-201ENST00000577469 82 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC091042.1-201ENST00000579213 173 ntBASIC7.23□□□□□ -1.25
RXRBP28702 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.23□□□□□ -1.25
RXRBP28702 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.23□□□□□ -1.25
RXRBP28702 AC090186.1-201ENST00000605991 572 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC007038.2-201ENST00000608095 740 ntBASIC7.23□□□□□ -1.25
RXRBP28702 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.23□□□□□ -1.25
RXRBP28702 AC004067.1-201ENST00000608733 700 ntBASIC7.23□□□□□ -1.25
RXRBP28702 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
RXRBP28702 AC015660.5-201ENST00000623238 564 ntBASIC7.23□□□□□ -1.25
RXRBP28702 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RXRBP28702 AL122126.1-201ENST00000546905 1318 ntBASIC7.23□□□□□ -1.25
RXRBP28702 ZNF833P-201ENST00000424938 1494 ntBASIC7.23□□□□□ -1.25
RXRBP28702 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.23□□□□□ -1.25
RXRBP28702 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.22□□□□□ -1.25
RXRBP28702 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 AC011369.2-201ENST00000624423 1567 ntBASIC7.22□□□□□ -1.25
RXRBP28702 SNORD56.4-201ENST00000363883 71 ntBASIC7.22□□□□□ -1.25
RXRBP28702 RNA5SP455-201ENST00000365190 119 ntBASIC7.22□□□□□ -1.25
RXRBP28702 MIR134-201ENST00000385258 73 ntBASIC7.22□□□□□ -1.25
RXRBP28702 SNORA26.8-201ENST00000391306 124 ntBASIC7.22□□□□□ -1.25
RXRBP28702 ST13P16-201ENST00000401760 781 ntBASIC7.22□□□□□ -1.25
RXRBP28702 RPS3AP23-201ENST00000401762 784 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 RPL12P43-201ENST00000420608 499 ntBASIC7.22□□□□□ -1.25
RXRBP28702 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 AL451062.2-201ENST00000427515 271 ntBASIC7.22□□□□□ -1.25
RXRBP28702 HIGD1AP12-201ENST00000427832 281 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.22□□□□□ -1.25
RXRBP28702 SNRPEP8-201ENST00000442866 260 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AL606662.1-201ENST00000445763 553 ntBASIC7.22□□□□□ -1.25
RXRBP28702 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 MTND2P24-201ENST00000453434 806 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 RPL30P6-201ENST00000475925 342 ntBASIC7.22□□□□□ -1.25
RXRBP28702 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.22□□□□□ -1.25
RXRBP28702 AC105384.2-201ENST00000508433 640 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AC008837.1-201ENST00000511513 412 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AC109471.1-201ENST00000511631 612 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AC091965.2-201ENST00000512324 613 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.22□□□□□ -1.25
RXRBP28702 IGKV1-32-201ENST00000519290 311 ntBASIC7.22□□□□□ -1.25
RXRBP28702 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.22□□□□□ -1.25
RXRBP28702 RPS3AP4-201ENST00000555161 764 ntBASIC7.22□□□□□ -1.25
RXRBP28702 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.22□□□□□ -1.25
RXRBP28702 MIR4301-201ENST00000577203 66 ntBASIC7.22□□□□□ -1.25
RXRBP28702 MIR4277-201ENST00000578298 84 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms