Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC021006.3-201ENST00000530771 192 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 OR5D15P-201ENST00000531671 942 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 HNRNPCP4-201ENST00000571636 900 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 RN7SL802P-201ENST00000577858 299 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 MIR3934-201ENST00000579806 107 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC022726.1-201ENST00000587475 207 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 VN1R84P-201ENST00000593697 235 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC008536.1-201ENST00000602872 669 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC011453.2-201ENST00000603737 729 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AL096803.3-201ENST00000609032 532 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 Mico1.1-201ENST00000611698 204 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AL049539.1-201ENST00000611964 459 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AL445528.2-201ENST00000620582 470 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 CFTRP2-201ENST00000634304 199 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 THAP12P5-201ENST00000405864 2275 ntBASIC4.85□□□□□ -1.63
HLA-DPA1P20036 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPA1P20036 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 NCLP2-201ENST00000416078 1462 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RNU6-883P-201ENST00000384597 107 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 U3.30-201ENST00000391308 210 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 MIR937-201ENST00000401271 86 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AP000580.1-201ENST00000404439 358 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 E2F6P2-201ENST00000420708 748 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CR848007.2-201ENST00000424918 787 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AL772161.1-201ENST00000439130 476 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 MTND2P8-201ENST00000450555 1025 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 OR52J1P-201ENST00000450596 932 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RPL35AP28-201ENST00000459730 331 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RPS3AP41-201ENST00000462701 778 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC231760.1-201ENST00000498002 260 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 RNU1-6P-201ENST00000516290 144 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 MORF4L1P3-201ENST00000525966 950 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 PCNPP1-201ENST00000552501 511 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 BGLT3-201ENST00000564523 994 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 MIR4512-201ENST00000583257 77 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 ZNF92P3-201ENST00000596594 954 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AC005084.1-201ENST00000605160 304 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 CR392039.4-201ENST00000624968 501 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 ZFRP1-201ENST00000457579 2970 ntBASIC4.84□□□□□ -1.63
HLA-DPA1P20036 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPA1P20036 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DPA1P20036 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DPA1P20036 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 RNF6P1-201ENST00000444889 1784 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 SAMMSON-226ENST00000642089 1582 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 GTF2H2B-203ENST00000508065 1432 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 SNORD115-48-201ENST00000364764 76 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms