Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
NFKB1P19838 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.65□□□□□ -1.35
NFKB1P19838 RBPJP6-201ENST00000411556 1431 ntBASIC6.65□□□□□ -1.35
NFKB1P19838 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.65□□□□□ -1.35
NFKB1P19838 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.65□□□□□ -1.35
NFKB1P19838 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NFKB1P19838 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NFKB1P19838 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
NFKB1P19838 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.65□□□□□ -1.35
NFKB1P19838 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.65□□□□□ -1.35
NFKB1P19838 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NFKB1P19838 AC006378.2-201ENST00000623178 2476 ntBASIC6.65□□□□□ -1.35
NFKB1P19838 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
NFKB1P19838 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NFKB1P19838 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 AC068870.3-201ENST00000625077 2536 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NFKB1P19838 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 RNU1-5P-201ENST00000362684 144 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 RNU6-738P-201ENST00000384531 106 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 SNORA7A-201ENST00000384765 139 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC104297.1-201ENST00000393779 870 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 CYCSP52-201ENST00000422857 310 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 ISCA1P6-201ENST00000427740 390 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 MTND6P5-201ENST00000448266 512 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 ARPC3P5-201ENST00000448802 534 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 Z82190.1-201ENST00000454534 490 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC233279.1-201ENST00000455300 423 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AKR1D1P1-201ENST00000457236 936 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 RNU6-420P-201ENST00000458780 107 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.64□□□□□ -1.35
NFKB1P19838 RPL19P11-201ENST00000495944 589 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC139783.2-201ENST00000504847 1145 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 RNU6-583P-201ENST00000516012 92 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 HMGB1P23-201ENST00000518743 568 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC105029.1-201ENST00000520250 669 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.64□□□□□ -1.35
NFKB1P19838 AL355375.2-201ENST00000574825 175 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NFKB1P19838 RN7SL208P-201ENST00000577964 296 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.64□□□□□ -1.35
NFKB1P19838 AP001437.1-201ENST00000608783 456 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.64□□□□□ -1.35
NFKB1P19838 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.64□□□□□ -1.35
NFKB1P19838 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.64□□□□□ -1.35
NFKB1P19838 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NFKB1P19838 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 CCDC150P1-201ENST00000537123 2215 ntBASIC6.64□□□□□ -1.35
NFKB1P19838 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NFKB1P19838 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
NFKB1P19838 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
NFKB1P19838 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NFKB1P19838 RNU6-451P-201ENST00000362921 107 ntBASIC6.63□□□□□ -1.35
NFKB1P19838 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NFKB1P19838 AC026310.1-201ENST00000396004 378 ntBASIC6.63□□□□□ -1.35
NFKB1P19838 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NFKB1P19838 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms