Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 AC074029.1-201ENST00000552531 1044 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 RBM22P12-201ENST00000567098 1255 ntBASIC6.84□□□□□ -1.31
LIG1P18858 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.84□□□□□ -1.31
LIG1P18858 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.84□□□□□ -1.31
LIG1P18858 BNIP3P33-201ENST00000598912 569 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.84□□□□□ -1.31
LIG1P18858 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 AC023158.2-201ENST00000614876 543 ntBASIC6.84□□□□□ -1.31
LIG1P18858 AC015726.3-201ENST00000624501 418 ntBASIC6.84□□□□□ -1.31
LIG1P18858 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 AC099063.3-201ENST00000642066 185 ntBASIC6.84□□□□□ -1.31
LIG1P18858 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.84□□□□□ -1.31
LIG1P18858 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
LIG1P18858 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 AC104966.1-201ENST00000467010 1464 ntBASIC6.84□□□□□ -1.31
LIG1P18858 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.84□□□□□ -1.31
LIG1P18858 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LIG1P18858 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.84□□□□□ -1.32
LIG1P18858 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
LIG1P18858 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
LIG1P18858 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.32
LIG1P18858 AC003985.2-201ENST00000562268 1669 ntBASIC6.84□□□□□ -1.32
LIG1P18858 AC022325.1-201ENST00000502748 2199 ntBASIC6.84□□□□□ -1.32
LIG1P18858 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.83□□□□□ -1.32
LIG1P18858 AL121839.2-201ENST00000565058 6943 ntBASIC6.83□□□□□ -1.32
LIG1P18858 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.83□□□□□ -1.32
LIG1P18858 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
LIG1P18858 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.83□□□□□ -1.32
LIG1P18858 SUGT1P2-201ENST00000379452 992 ntBASIC6.83□□□□□ -1.32
LIG1P18858 TPT1P2-201ENST00000413105 503 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AL096829.1-201ENST00000413677 457 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.83□□□□□ -1.32
LIG1P18858 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.83□□□□□ -1.32
LIG1P18858 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 RPSAP65-201ENST00000429660 595 ntBASIC6.83□□□□□ -1.32
LIG1P18858 YWHAEP5-201ENST00000431545 765 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 YWHAZP2-201ENST00000440317 728 ntBASIC6.83□□□□□ -1.32
LIG1P18858 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 FAR2P1-206ENST00000449736 709 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AL591363.1-201ENST00000450091 483 ntBASIC6.83□□□□□ -1.32
LIG1P18858 DDX39BP2-208ENST00000453923 258 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC006499.5-201ENST00000505037 514 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AC074344.1-201ENST00000512823 224 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AC136777.2-201ENST00000522979 358 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.83□□□□□ -1.32
LIG1P18858 AC005363.1-201ENST00000530779 351 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.83□□□□□ -1.32
LIG1P18858 AC092747.2-201ENST00000545069 983 ntBASIC6.83□□□□□ -1.32
LIG1P18858 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.83□□□□□ -1.32
LIG1P18858 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AC126615.2-201ENST00000553003 515 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.83□□□□□ -1.32
LIG1P18858 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.83□□□□□ -1.32
LIG1P18858 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.83□□□□□ -1.32
LIG1P18858 AL499605.1-201ENST00000604628 403 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC012557.1-201ENST00000607115 611 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AC004948.1-201ENST00000609858 672 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AL512652.1-201ENST00000619006 500 ntBASIC6.83□□□□□ -1.32
LIG1P18858 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
LIG1P18858 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.83□□□□□ -1.32
LIG1P18858 AC116618.1-201ENST00000634617 774 ntBASIC6.83□□□□□ -1.32
LIG1P18858 AF001550.2-201ENST00000636643 217 ntBASIC6.83□□□□□ -1.32
LIG1P18858 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LIG1P18858 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
LIG1P18858 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.82□□□□□ -1.32
LIG1P18858 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LIG1P18858 RNU6-259P-201ENST00000383999 107 ntBASIC6.82□□□□□ -1.32
LIG1P18858 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LIG1P18858 RNA5SP156-201ENST00000410250 110 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms