Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NCK1P16333 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 AC022893.2-201ENST00000564832 3296 ntBASIC4.28□□□□□ -1.72
NCK1P16333 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 DPPA2P3-201ENST00000411853 655 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 GTF2IP2-201ENST00000424290 697 ntBASIC4.28□□□□□ -1.72
NCK1P16333 RPL12P34-201ENST00000424532 479 ntBASIC4.28□□□□□ -1.72
NCK1P16333 RPL23AP25-201ENST00000430973 463 ntBASIC4.28□□□□□ -1.72
NCK1P16333 CNOT7P2-201ENST00000441051 832 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC245517.2-201ENST00000442890 346 ntBASIC4.28□□□□□ -1.72
NCK1P16333 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 H2AFZP5-201ENST00000446960 382 ntBASIC4.28□□□□□ -1.72
NCK1P16333 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
NCK1P16333 MORF4L1P4-201ENST00000450245 976 ntBASIC4.28□□□□□ -1.72
NCK1P16333 OR2AF1P-201ENST00000454899 889 ntBASIC4.28□□□□□ -1.72
NCK1P16333 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.28□□□□□ -1.72
NCK1P16333 COPS8P2-201ENST00000473228 627 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC104109.1-201ENST00000498563 436 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC021087.2-201ENST00000504656 1203 ntBASIC4.28□□□□□ -1.72
NCK1P16333 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 RN7SKP66-201ENST00000516681 231 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.28□□□□□ -1.72
NCK1P16333 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.28□□□□□ -1.72
NCK1P16333 MTATP6P25-201ENST00000574491 261 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.28□□□□□ -1.72
NCK1P16333 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NCK1P16333 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.28□□□□□ -1.72
NCK1P16333 PSMA6P4-201ENST00000603247 718 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC023762.1-201ENST00000603280 584 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AL160290.3-201ENST00000604869 165 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AP000864.1-201ENST00000609424 650 ntBASIC4.28□□□□□ -1.72
NCK1P16333 AC011472.4-201ENST00000615848 491 ntBASIC4.28□□□□□ -1.72
NCK1P16333 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NCK1P16333 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.28□□□□□ -1.72
NCK1P16333 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NCK1P16333 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
NCK1P16333 Z98755.1-201ENST00000407015 1384 ntBASIC4.27□□□□□ -1.73
NCK1P16333 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCK1P16333 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NCK1P16333 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
NCK1P16333 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NCK1P16333 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCK1P16333 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 RNU6-171P-201ENST00000384354 107 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RNU6-31P-201ENST00000384388 108 ntBASIC4.27□□□□□ -1.73
NCK1P16333 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
NCK1P16333 FCF1P5-201ENST00000406490 482 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 AC073136.2-201ENST00000417282 849 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC048351.1-201ENST00000420064 602 ntBASIC4.27□□□□□ -1.73
NCK1P16333 DYNLL1P7-201ENST00000429273 258 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RPS20P1-201ENST00000434853 354 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.27□□□□□ -1.73
NCK1P16333 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC092647.3-201ENST00000443044 633 ntBASIC4.27□□□□□ -1.73
NCK1P16333 GEMIN8P3-201ENST00000445417 720 ntBASIC4.27□□□□□ -1.73
NCK1P16333 PPIAP20-201ENST00000449839 135 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RPS5P7-201ENST00000456664 608 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RN7SL30P-201ENST00000488416 306 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC005912.1-201ENST00000495392 255 ntBASIC4.27□□□□□ -1.73
NCK1P16333 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
NCK1P16333 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 AF186190.1-201ENST00000517470 480 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.27□□□□□ -1.73
NCK1P16333 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.27□□□□□ -1.73
NCK1P16333 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.27□□□□□ -1.73
NCK1P16333 AC008083.2-201ENST00000546707 476 ntBASIC4.27□□□□□ -1.73
NCK1P16333 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.27□□□□□ -1.73
NCK1P16333 AC105129.1-201ENST00000560250 297 ntBASIC4.27□□□□□ -1.73
NCK1P16333 RN7SL652P-201ENST00000577769 300 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.27□□□□□ -1.73
NCK1P16333 RPL26P30-202ENST00000602923 645 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC133552.5-201ENST00000604266 540 ntBASIC4.27□□□□□ -1.73
NCK1P16333 AC007423.1-201ENST00000605009 627 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms