Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 NPM1P18-201ENST00000434232 732 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A1P12109 RPS23P2-201ENST00000463671 415 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC092324.1-201ENST00000468671 324 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 SYPL1P1-201ENST00000473622 768 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 IGLV2-34-201ENST00000490007 283 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 RN7SL591P-201ENST00000496150 292 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC080014.1-201ENST00000496877 1201 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 CDH12P2-201ENST00000504393 298 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 NDUFB4P12-201ENST00000513465 390 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 FABP5P12-201ENST00000515543 389 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 RNU6-232P-201ENST00000517144 64 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 IGLV3-24-201ENST00000517477 197 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 RPL12P22-201ENST00000519073 490 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A1P12109 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A1P12109 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC022662.1-201ENST00000580252 331 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 RN7SL622P-201ENST00000585292 275 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 AL031985.2-201ENST00000600955 480 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC005084.1-201ENST00000605160 304 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AP003392.5-201ENST00000607857 415 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AL162574.1-201ENST00000615702 950 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 AP003072.4-201ENST00000624580 310 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
COL6A1P12109 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 OR5BE1P-202ENST00000641168 1176 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A1P12109 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A1P12109 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A1P12109 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A1P12109 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A1P12109 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A1P12109 AL121768.1-201ENST00000613917 2544 ntBASIC6.18□□□□□ -1.42
COL6A1P12109 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A1P12109 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 AL390237.1-201ENST00000404226 1415 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
COL6A1P12109 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A1P12109 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 AC093849.1-201ENST00000563631 2209 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 KARSP3-201ENST00000571212 1504 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 SNORD1C-201ENST00000363315 78 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 RNU6-532P-201ENST00000384318 107 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 Y_RNA.559-201ENST00000384686 107 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 CHMP1B2P-201ENST00000399581 597 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 XKRYP4-201ENST00000414395 483 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AC009302.1-201ENST00000417147 390 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 MTCYBP5-201ENST00000423752 1135 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 RPS4XP16-201ENST00000427198 791 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 HIGD1AP12-201ENST00000427832 281 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A1P12109 RPL31P44-201ENST00000447680 377 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 XKRYP5-201ENST00000449659 483 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A1P12109 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A1P12109 PSMC1P13-201ENST00000458195 985 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 RNU7-27P-201ENST00000459281 62 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL6A1P12109 RN7SL738P-201ENST00000470264 297 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 BZW1P2-201ENST00000473537 826 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AC069528.1-202ENST00000482888 637 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A1P12109 AC108120.2-201ENST00000512973 294 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.17□□□□□ -1.42
COL6A1P12109 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A1P12109 PDCL2P2-201ENST00000533651 189 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 BNIP3P1-201ENST00000547295 580 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 AC063949.1-201ENST00000552900 865 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A1P12109 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL6A1P12109 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A1P12109 AP001269.3-201ENST00000588718 329 ntBASIC6.17□□□□□ -1.42
COL6A1P12109 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms