Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.95□□□□□ -1.62
VTNP04004 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
VTNP04004 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.95□□□□□ -1.62
VTNP04004 RN7SL303P-201ENST00000469773 251 ntBASIC4.95□□□□□ -1.62
VTNP04004 RN7SL810P-201ENST00000493031 276 ntBASIC4.95□□□□□ -1.62
VTNP04004 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
VTNP04004 AC117525.1-201ENST00000515228 503 ntBASIC4.95□□□□□ -1.62
VTNP04004 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.95□□□□□ -1.62
VTNP04004 OR4V1P-201ENST00000525394 1140 ntBASIC4.95□□□□□ -1.62
VTNP04004 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
VTNP04004 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.95□□□□□ -1.62
VTNP04004 AC027281.1-201ENST00000574178 758 ntBASIC4.95□□□□□ -1.62
VTNP04004 ADAD1P2-201ENST00000588476 646 ntBASIC4.95□□□□□ -1.62
VTNP04004 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.95□□□□□ -1.62
VTNP04004 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.95□□□□□ -1.62
VTNP04004 AC005014.3-201ENST00000605985 190 ntBASIC4.95□□□□□ -1.62
VTNP04004 AL133445.2-201ENST00000611191 527 ntBASIC4.95□□□□□ -1.62
VTNP04004 MIR6716-201ENST00000613413 80 ntBASIC4.95□□□□□ -1.62
VTNP04004 AC009032.1-201ENST00000617574 431 ntBASIC4.95□□□□□ -1.62
VTNP04004 LINC00216-201ENST00000623548 1126 ntBASIC4.95□□□□□ -1.62
VTNP04004 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTNP04004 THAP12P5-201ENST00000405864 2275 ntBASIC4.95□□□□□ -1.62
VTNP04004 LINC00622-201ENST00000562811 1570 ntBASIC4.95□□□□□ -1.62
VTNP04004 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTNP04004 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.94□□□□□ -1.62
VTNP04004 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.94□□□□□ -1.62
VTNP04004 STX3-208ENST00000641815 3236 ntBASIC4.94□□□□□ -1.62
VTNP04004 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 AL731566.1-201ENST00000620490 1937 ntBASIC4.94□□□□□ -1.62
VTNP04004 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VTNP04004 AL592291.1-201ENST00000403830 352 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.94□□□□□ -1.62
VTNP04004 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 RAD23BP1-201ENST00000421404 1227 ntBASIC4.94□□□□□ -1.62
VTNP04004 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 MRPS33P4-201ENST00000434892 317 ntBASIC4.94□□□□□ -1.62
VTNP04004 NMNAT1P2-201ENST00000435192 860 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 ARAFP2-201ENST00000440565 559 ntBASIC4.94□□□□□ -1.62
VTNP04004 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
VTNP04004 MRPL48P1-201ENST00000445390 636 ntBASIC4.94□□□□□ -1.62
VTNP04004 RAB28P3-201ENST00000448325 597 ntBASIC4.94□□□□□ -1.62
VTNP04004 RN7SL98P-201ENST00000462271 300 ntBASIC4.94□□□□□ -1.62
VTNP04004 RPS27AP17-201ENST00000463344 455 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC053481.1-201ENST00000467217 306 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC020890.1-201ENST00000491837 504 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 RNA5SP303-201ENST00000516192 130 ntBASIC4.94□□□□□ -1.62
VTNP04004 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 OR8A2P-201ENST00000528631 952 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.94□□□□□ -1.62
VTNP04004 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VTNP04004 AC020910.2-201ENST00000603635 610 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC091979.2-201ENST00000607514 214 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC068831.8-201ENST00000620171 435 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC080188.3-201ENST00000624842 748 ntBASIC4.94□□□□□ -1.62
VTNP04004 AC006065.6-201ENST00000625201 545 ntBASIC4.94□□□□□ -1.62
VTNP04004 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 AL731532.2-201ENST00000623542 1953 ntBASIC4.94□□□□□ -1.62
VTNP04004 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.94□□□□□ -1.62
VTNP04004 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
VTNP04004 AC006484.1-201ENST00000435086 1884 ntBASIC4.94□□□□□ -1.62
VTNP04004 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.94□□□□□ -1.62
VTNP04004 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTNP04004 SALL4P2-201ENST00000423288 2910 ntBASIC4.93□□□□□ -1.62
VTNP04004 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.93□□□□□ -1.62
VTNP04004 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTNP04004 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTNP04004 SNORA27.3-201ENST00000364937 134 ntBASIC4.93□□□□□ -1.62
VTNP04004 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.93□□□□□ -1.62
VTNP04004 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
VTNP04004 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.93□□□□□ -1.62
VTNP04004 AL356967.1-201ENST00000406305 431 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC011933.1-201ENST00000413334 321 ntBASIC4.93□□□□□ -1.62
VTNP04004 TRIM60P17-201ENST00000415181 719 ntBASIC4.93□□□□□ -1.62
VTNP04004 RNF19BPX-201ENST00000426224 625 ntBASIC4.93□□□□□ -1.62
VTNP04004 AL390879.2-203ENST00000426943 1121 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC004975.1-201ENST00000428733 208 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.93□□□□□ -1.62
VTNP04004 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC012671.1-201ENST00000451912 203 ntBASIC4.93□□□□□ -1.62
VTNP04004 NUTF2P7-201ENST00000453086 375 ntBASIC4.93□□□□□ -1.62
VTNP04004 DHFRP3-201ENST00000455595 559 ntBASIC4.93□□□□□ -1.62
VTNP04004 RPL7P32-201ENST00000457119 744 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC116533.1-201ENST00000459748 321 ntBASIC4.93□□□□□ -1.62
VTNP04004 RN7SL41P-201ENST00000476144 297 ntBASIC4.93□□□□□ -1.62
VTNP04004 AL161747.1-201ENST00000480068 358 ntBASIC4.93□□□□□ -1.62
VTNP04004 OR11I1P-201ENST00000486033 954 ntBASIC4.93□□□□□ -1.62
VTNP04004 AC023424.1-201ENST00000496058 459 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms