Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR5096-201ENST00000583713 70 ntBASIC4.69□□□□□ -1.66
APOEP02649 MIR4715-201ENST00000584117 79 ntBASIC4.69□□□□□ -1.66
APOEP02649 RPL7P50-201ENST00000600588 727 ntBASIC4.69□□□□□ -1.66
APOEP02649 AC068790.4-201ENST00000602474 263 ntBASIC4.69□□□□□ -1.66
APOEP02649 AC006065.6-201ENST00000625201 545 ntBASIC4.69□□□□□ -1.66
APOEP02649 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.69□□□□□ -1.66
APOEP02649 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 LINC00622-201ENST00000562811 1570 ntBASIC4.69□□□□□ -1.66
APOEP02649 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
APOEP02649 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.68□□□□□ -1.66
APOEP02649 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
APOEP02649 RPL21P108-201ENST00000413857 481 ntBASIC4.68□□□□□ -1.66
APOEP02649 RAD23BP1-201ENST00000421404 1227 ntBASIC4.68□□□□□ -1.66
APOEP02649 RPL23AP25-201ENST00000430973 463 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 RN7SL41P-201ENST00000476144 297 ntBASIC4.68□□□□□ -1.66
APOEP02649 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 NDUFB4P12-201ENST00000513465 390 ntBASIC4.68□□□□□ -1.66
APOEP02649 RAB9BP1-201ENST00000519581 626 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 AP000827.1-201ENST00000527814 258 ntBASIC4.68□□□□□ -1.66
APOEP02649 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 BPIFA4P-203ENST00000603168 689 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC008745.1-201ENST00000604064 271 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC115286.1-201ENST00000604298 434 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.68□□□□□ -1.66
APOEP02649 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 AC012020.1-201ENST00000624541 1728 ntBASIC4.68□□□□□ -1.66
APOEP02649 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.68□□□□□ -1.66
APOEP02649 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
APOEP02649 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
APOEP02649 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 AL929601.4-201ENST00000613011 1341 ntBASIC4.68□□□□□ -1.66
APOEP02649 AC139769.1-204ENST00000472297 1931 ntBASIC4.68□□□□□ -1.66
APOEP02649 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
APOEP02649 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
APOEP02649 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 MTND5P23-201ENST00000430812 1655 ntBASIC4.67□□□□□ -1.66
APOEP02649 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
APOEP02649 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.67□□□□□ -1.66
APOEP02649 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
APOEP02649 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
APOEP02649 SNORA56-201ENST00000383966 129 ntBASIC4.67□□□□□ -1.66
APOEP02649 HDGFP1-201ENST00000405943 252 ntBASIC4.67□□□□□ -1.66
APOEP02649 EIF4A1P3-201ENST00000411521 244 ntBASIC4.67□□□□□ -1.66
APOEP02649 AL807761.1-201ENST00000417622 171 ntBASIC4.67□□□□□ -1.66
APOEP02649 AP001324.1-201ENST00000428553 399 ntBASIC4.67□□□□□ -1.66
APOEP02649 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.67□□□□□ -1.66
APOEP02649 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.67□□□□□ -1.66
APOEP02649 AC011998.1-201ENST00000433403 117 ntBASIC4.67□□□□□ -1.66
APOEP02649 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 GEMIN8P3-201ENST00000445417 720 ntBASIC4.67□□□□□ -1.66
APOEP02649 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.67□□□□□ -1.66
APOEP02649 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 AC012671.1-201ENST00000451912 203 ntBASIC4.67□□□□□ -1.66
APOEP02649 AC133473.1-201ENST00000455173 299 ntBASIC4.67□□□□□ -1.66
APOEP02649 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.67□□□□□ -1.66
APOEP02649 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 RPL21P126-201ENST00000470049 478 ntBASIC4.67□□□□□ -1.66
APOEP02649 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.67□□□□□ -1.66
APOEP02649 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.67□□□□□ -1.66
APOEP02649 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.67□□□□□ -1.66
APOEP02649 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 AC012409.3-201ENST00000611343 981 ntBASIC4.67□□□□□ -1.66
APOEP02649 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
APOEP02649 MIR7641-1-201ENST00000627518 61 ntBASIC4.67□□□□□ -1.66
APOEP02649 AC138627.1-204ENST00000641894 765 ntBASIC4.67□□□□□ -1.66
APOEP02649 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.67□□□□□ -1.66
APOEP02649 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms