Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 MTND5P1-201ENST00000445440 1375 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 AC107068.1-201ENST00000563286 4218 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 MRPL50P1-201ENST00000431951 384 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AC104978.1-201ENST00000449387 391 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 ISCUP1-201ENST00000454451 448 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 AL359757.2-201ENST00000624309 274 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.04□□□□□ -1.76
SPTA1P02549 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SPTA1P02549 TRIM51GP-201ENST00000534741 1350 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.04□□□□□ -1.76
SPTA1P02549 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SPTA1P02549 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.04□□□□□ -1.76
SPTA1P02549 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 AC233263.6-201ENST00000631132 1963 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 AL139095.1-201ENST00000404326 391 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 RPL7P2-201ENST00000427639 268 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC114495.1-201ENST00000441274 436 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 RNA5SP246-201ENST00000458909 119 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 PLGLA-201ENST00000465668 449 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 PPIAP15-201ENST00000479662 484 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 RN7SL691P-201ENST00000494487 301 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 AC098799.3-201ENST00000506095 438 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.04□□□□□ -1.76
SPTA1P02549 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.04□□□□□ -1.76
SPTA1P02549 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.04□□□□□ -1.76
SPTA1P02549 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.04□□□□□ -1.76
SPTA1P02549 AC015967.1-201ENST00000619893 476 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 LINC01808-202ENST00000641680 1116 ntBASIC4.04□□□□□ -1.76
SPTA1P02549 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SPTA1P02549 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SPTA1P02549 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SPTA1P02549 RLIMP1-201ENST00000339626 1680 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SPTA1P02549 RNA5SP72-201ENST00000364442 117 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.03□□□□□ -1.76
SPTA1P02549 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 AC025518.1-201ENST00000479856 347 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AC136777.2-201ENST00000522979 358 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.03□□□□□ -1.76
SPTA1P02549 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 VN2R3P-201ENST00000422626 1412 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SPTA1P02549 AC006206.1-201ENST00000544842 3387 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 RN7SKP185-201ENST00000362813 326 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.03□□□□□ -1.76
SPTA1P02549 MFSD13B-201ENST00000420133 1290 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.03□□□□□ -1.76
SPTA1P02549 AL162151.2-201ENST00000448875 158 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.03□□□□□ -1.76
SPTA1P02549 RPS4XP15-201ENST00000489210 795 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 RPL35P6-201ENST00000490024 372 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AC006499.5-201ENST00000505037 514 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 DUXAP2-201ENST00000519198 589 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.03□□□□□ -1.76
SPTA1P02549 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.03□□□□□ -1.76
SPTA1P02549 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPTA1P02549 AC140113.4-201ENST00000622087 222 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 DDX18P5-201ENST00000534547 1306 ntBASIC4.03□□□□□ -1.76
SPTA1P02549 MAPK10-328ENST00000641553 4009 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms