Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 RPA2P2-201ENST00000419698 796 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC092570.3-201ENST00000420113 693 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC062016.2-201ENST00000420950 676 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 IPMKP1-201ENST00000425988 855 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 CYCSP11-201ENST00000436426 315 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 CACYBPP1-201ENST00000438592 684 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC018638.3-201ENST00000461273 132 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 UBA52P7-201ENST00000486088 380 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 RN7SL97P-201ENST00000486780 299 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC146944.2-203ENST00000502493 354 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC021087.2-201ENST00000504656 1203 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL592156.1-201ENST00000508758 304 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC139495.1-202ENST00000513164 354 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 NDUFB4P12-201ENST00000513465 390 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 RN7SKP260-201ENST00000516907 149 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 IGLVIV-53-201ENST00000520107 367 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 NPM1P35-201ENST00000533043 868 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 OR8X1P-201ENST00000534542 869 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC134349.2-201ENST00000535136 910 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AP006289.1-201ENST00000538089 277 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL049839.1-201ENST00000556151 657 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC084373.1-201ENST00000603311 235 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 MIR6729-201ENST00000618194 65 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL353662.3-201ENST00000625131 237 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL355480.1-201ENST00000629041 99 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC083899.2-201ENST00000423285 1376 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ZFRP1-201ENST00000457579 2970 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC017007.4-201ENST00000503353 1352 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SNORA17.1-201ENST00000362945 126 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 GSTA12P-201ENST00000402398 508 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 DUTP5-201ENST00000406790 469 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AL512504.1-201ENST00000415494 778 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AL355433.1-201ENST00000422804 300 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 MTND2P11-201ENST00000423638 648 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RPL7P28-201ENST00000437739 740 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AL353898.1-201ENST00000444055 238 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 MTND3P4-201ENST00000453537 303 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RN7SL172P-201ENST00000460535 303 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RPL23AP71-201ENST00000470966 469 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RN7SL30P-201ENST00000488416 306 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RN7SL205P-201ENST00000490174 284 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC017037.1-201ENST00000508460 471 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms