Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 AL133244.1-201ENST00000456007 258 ntBASIC4.85□□□□□ -1.63
LDLRP01130 CYCSP34-201ENST00000458172 304 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 AC112206.1-201ENST00000468416 477 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC108729.1-201ENST00000487812 947 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 AC004980.4-201ENST00000513375 203 ntBASIC4.85□□□□□ -1.63
LDLRP01130 RNU6-1308P-201ENST00000516817 103 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC026407.1-201ENST00000518369 204 ntBASIC4.85□□□□□ -1.63
LDLRP01130 IGHV3-63-201ENST00000518422 341 ntBASIC4.85□□□□□ -1.63
LDLRP01130 HIGD1AP18-201ENST00000520730 278 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC107918.3-201ENST00000533272 382 ntBASIC4.85□□□□□ -1.63
LDLRP01130 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.85□□□□□ -1.63
LDLRP01130 AC005034.4-201ENST00000603612 899 ntBASIC4.85□□□□□ -1.63
LDLRP01130 SUMO2P14-201ENST00000604488 293 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 AC018926.1-201ENST00000616335 435 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC016957.2-201ENST00000616998 848 ntBASIC4.85□□□□□ -1.63
LDLRP01130 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 MTND4P9-201ENST00000507819 1346 ntBASIC4.85□□□□□ -1.63
LDLRP01130 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.85□□□□□ -1.63
LDLRP01130 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDLRP01130 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
LDLRP01130 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 VPS35P1-201ENST00000563400 1518 ntBASIC4.84□□□□□ -1.63
LDLRP01130 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LDLRP01130 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LDLRP01130 RNU1-32P-201ENST00000363937 159 ntBASIC4.84□□□□□ -1.63
LDLRP01130 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 RNU1-74P-201ENST00000384108 171 ntBASIC4.84□□□□□ -1.63
LDLRP01130 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 RNA5SP487-201ENST00000410186 122 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRP01130 RPL7L1P1-201ENST00000448259 785 ntBASIC4.84□□□□□ -1.63
LDLRP01130 TPT1P12-201ENST00000448968 492 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC091180.1-201ENST00000462104 372 ntBASIC4.84□□□□□ -1.63
LDLRP01130 RN7SL459P-201ENST00000481078 302 ntBASIC4.84□□□□□ -1.63
LDLRP01130 IGLV2-34-201ENST00000490007 283 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC005412.2-201ENST00000492004 341 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC093534.1-201ENST00000504977 132 ntBASIC4.84□□□□□ -1.63
LDLRP01130 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 AC112518.2-201ENST00000508565 425 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRP01130 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRP01130 OR8X1P-201ENST00000534542 869 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 GLRXP2-201ENST00000555594 321 ntBASIC4.84□□□□□ -1.63
LDLRP01130 SETP1-201ENST00000556014 845 ntBASIC4.84□□□□□ -1.63
LDLRP01130 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 AC079880.2-201ENST00000603790 1213 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC008814.1-201ENST00000603797 406 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC008745.1-201ENST00000604064 271 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC097478.2-201ENST00000610572 514 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC104763.3-201ENST00000613765 618 ntBASIC4.84□□□□□ -1.63
LDLRP01130 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LDLRP01130 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 AL138955.1-201ENST00000622881 1040 ntBASIC4.84□□□□□ -1.63
LDLRP01130 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 AC090772.4-201ENST00000623599 362 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AP002967.1-201ENST00000624203 539 ntBASIC4.84□□□□□ -1.63
LDLRP01130 AC004777.1-201ENST00000624317 287 ntBASIC4.84□□□□□ -1.63
LDLRP01130 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 OR6C71P-202ENST00000641886 1107 ntBASIC4.84□□□□□ -1.63
LDLRP01130 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRP01130 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LDLRP01130 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LDLRP01130 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDLRP01130 LINC01355-201ENST00000566551 5444 ntBASIC4.84□□□□□ -1.64
LDLRP01130 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.84□□□□□ -1.64
LDLRP01130 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms