Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LSM1O15116 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC103591.2-201ENST00000265259 766 ntBASIC4.48□□□□□ -1.69
LSM1O15116 SNORA74A-201ENST00000364089 198 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AL589647.1-201ENST00000402485 466 ntBASIC4.48□□□□□ -1.69
LSM1O15116 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LSM1O15116 AL591848.1-201ENST00000413092 322 ntBASIC4.48□□□□□ -1.69
LSM1O15116 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.48□□□□□ -1.69
LSM1O15116 OR2B7P-201ENST00000429302 934 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.48□□□□□ -1.69
LSM1O15116 OR7L1P-201ENST00000456181 380 ntBASIC4.48□□□□□ -1.69
LSM1O15116 RPL7AP52-201ENST00000458096 790 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC096741.1-201ENST00000472250 846 ntBASIC4.48□□□□□ -1.69
LSM1O15116 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.48□□□□□ -1.69
LSM1O15116 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LSM1O15116 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.48□□□□□ -1.69
LSM1O15116 BTF3P13-201ENST00000513224 490 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC008033.2-201ENST00000542626 177 ntBASIC4.48□□□□□ -1.69
LSM1O15116 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.48□□□□□ -1.69
LSM1O15116 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 AC105129.1-201ENST00000560250 297 ntBASIC4.48□□□□□ -1.69
LSM1O15116 MTND6P33-201ENST00000571794 183 ntBASIC4.48□□□□□ -1.69
LSM1O15116 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.48□□□□□ -1.69
LSM1O15116 AC105105.5-201ENST00000622635 1294 ntBASIC4.48□□□□□ -1.69
LSM1O15116 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.48□□□□□ -1.69
LSM1O15116 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.48□□□□□ -1.69
LSM1O15116 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LSM1O15116 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LSM1O15116 AC009313.2-201ENST00000417893 1941 ntBASIC4.48□□□□□ -1.69
LSM1O15116 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
LSM1O15116 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
LSM1O15116 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LSM1O15116 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LSM1O15116 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LSM1O15116 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.47□□□□□ -1.69
LSM1O15116 RNA5SP123-201ENST00000363244 119 ntBASIC4.47□□□□□ -1.69
LSM1O15116 RNU6-670P-201ENST00000364312 104 ntBASIC4.47□□□□□ -1.69
LSM1O15116 RNU6-1251P-201ENST00000364502 107 ntBASIC4.47□□□□□ -1.69
LSM1O15116 RNU6-1279P-201ENST00000383917 103 ntBASIC4.47□□□□□ -1.69
LSM1O15116 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 AL450992.3-201ENST00000413192 568 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 RPL21P91-201ENST00000429231 479 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AL392003.1-201ENST00000434394 243 ntBASIC4.47□□□□□ -1.69
LSM1O15116 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.47□□□□□ -1.69
LSM1O15116 ELOCP10-201ENST00000440624 327 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AL451050.1-201ENST00000450126 415 ntBASIC4.47□□□□□ -1.69
LSM1O15116 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.47□□□□□ -1.69
LSM1O15116 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.47□□□□□ -1.69
LSM1O15116 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.47□□□□□ -1.69
LSM1O15116 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LSM1O15116 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.47□□□□□ -1.69
LSM1O15116 HMGB2P1-201ENST00000591146 634 ntBASIC4.47□□□□□ -1.69
LSM1O15116 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.47□□□□□ -1.69
LSM1O15116 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AC123786.2-201ENST00000603459 275 ntBASIC4.47□□□□□ -1.69
LSM1O15116 ELOCP34-201ENST00000604436 327 ntBASIC4.47□□□□□ -1.69
LSM1O15116 OR7A19P-201ENST00000608051 733 ntBASIC4.47□□□□□ -1.69
LSM1O15116 OR6R2P-201ENST00000609216 300 ntBASIC4.47□□□□□ -1.69
LSM1O15116 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AL669942.2-201ENST00000620352 697 ntBASIC4.47□□□□□ -1.69
LSM1O15116 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
LSM1O15116 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 CASC19-284ENST00000642142 1868 ntBASIC4.47□□□□□ -1.69
LSM1O15116 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
LSM1O15116 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.47□□□□□ -1.69
LSM1O15116 AC135352.1-201ENST00000506173 1418 ntBASIC4.46□□□□□ -1.69
LSM1O15116 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
LSM1O15116 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LSM1O15116 MTCO1P11-201ENST00000429111 1528 ntBASIC4.46□□□□□ -1.69
LSM1O15116 MAPK10-263ENST00000641052 4307 ntBASIC4.46□□□□□ -1.69
LSM1O15116 AC022893.2-201ENST00000564832 3296 ntBASIC4.46□□□□□ -1.7
LSM1O15116 SPATA2P1-201ENST00000431223 2055 ntBASIC4.46□□□□□ -1.7
LSM1O15116 C4BPAP1-201ENST00000415474 1893 ntBASIC4.46□□□□□ -1.7
LSM1O15116 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LSM1O15116 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LSM1O15116 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LSM1O15116 DPY19L1P2-201ENST00000426647 915 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC007559.1-201ENST00000428736 355 ntBASIC4.46□□□□□ -1.7
LSM1O15116 RBMY2QP-201ENST00000429799 1147 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC097523.2-201ENST00000435551 652 ntBASIC4.46□□□□□ -1.7
LSM1O15116 PSMD10P3-201ENST00000437000 448 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms