Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK2O00526 RPS26P28-201ENST00000470806 348 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC004453.1-201ENST00000487895 408 ntBASIC3.62□□□□□ -1.83
UPK2O00526 IGLV2-34-201ENST00000490007 283 ntBASIC3.62□□□□□ -1.83
UPK2O00526 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 MTND4LP2-201ENST00000502312 285 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC113430.1-201ENST00000506872 718 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC008694.2-201ENST00000517591 306 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC125612.1-201ENST00000547580 377 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK2O00526 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK2O00526 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK2O00526 MIR4646-201ENST00000580775 63 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK2O00526 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK2O00526 AC073091.2-201ENST00000603205 907 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC084373.1-201ENST00000603311 235 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC010201.1-201ENST00000605051 540 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AL353600.1-201ENST00000608148 251 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AC023509.5-201ENST00000617434 807 ntBASIC3.62□□□□□ -1.83
UPK2O00526 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK2O00526 AC092159.4-201ENST00000624944 550 ntBASIC3.62□□□□□ -1.83
UPK2O00526 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
UPK2O00526 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 CPHL1P-201ENST00000461341 3407 ntBASIC3.62□□□□□ -1.83
UPK2O00526 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK2O00526 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 AC005332.5-201ENST00000591222 2919 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
UPK2O00526 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 AC090971.4-201ENST00000560291 1800 ntBASIC3.61□□□□□ -1.83
UPK2O00526 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UPK2O00526 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UPK2O00526 AL590240.1-201ENST00000334118 313 ntBASIC3.61□□□□□ -1.83
UPK2O00526 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UPK2O00526 SPTLC1P2-201ENST00000407089 121 ntBASIC3.61□□□□□ -1.83
UPK2O00526 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.61□□□□□ -1.83
UPK2O00526 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 AL158073.1-201ENST00000426848 1104 ntBASIC3.61□□□□□ -1.83
UPK2O00526 RPS12P10-201ENST00000427031 377 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK2O00526 RPL12P46-201ENST00000436610 195 ntBASIC3.61□□□□□ -1.83
UPK2O00526 PSMD10P3-201ENST00000437000 448 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AL357520.1-201ENST00000441557 453 ntBASIC3.61□□□□□ -1.83
UPK2O00526 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 AC091685.2-201ENST00000454924 864 ntBASIC3.61□□□□□ -1.83
UPK2O00526 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK2O00526 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK2O00526 PGBD4P4-201ENST00000509673 613 ntBASIC3.61□□□□□ -1.83
UPK2O00526 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.61□□□□□ -1.83
UPK2O00526 SCARNA21.2-201ENST00000516600 166 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AP000676.2-201ENST00000529711 301 ntBASIC3.61□□□□□ -1.83
UPK2O00526 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK2O00526 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK2O00526 AC027281.1-201ENST00000574178 758 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 BMS1P7-201ENST00000602440 1052 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AC087283.1-201ENST00000604029 1074 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AL133338.2-201ENST00000604292 736 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AC005084.1-201ENST00000605160 304 ntBASIC3.61□□□□□ -1.83
UPK2O00526 MIR7154-201ENST00000620673 73 ntBASIC3.61□□□□□ -1.83
UPK2O00526 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK2O00526 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK2O00526 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 DDX18P3-201ENST00000404856 2007 ntBASIC3.61□□□□□ -1.83
UPK2O00526 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK2O00526 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 OR51C1P-202ENST00000641159 1444 ntBASIC3.61□□□□□ -1.83
UPK2O00526 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK2O00526 AL592182.3-201ENST00000642132 3304 ntBASIC3.6□□□□□ -1.83
UPK2O00526 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK2O00526 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK2O00526 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK2O00526 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK2O00526 AC093535.2-201ENST00000624769 2326 ntBASIC3.6□□□□□ -1.83
UPK2O00526 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK2O00526 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UPK2O00526 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK2O00526 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
UPK2O00526 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms