Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RPL23AP12-201ENST00000467573 473 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 RNU1-6P-201ENST00000516290 144 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 SNORA31.13-201ENST00000516624 135 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 MTND2P7-201ENST00000521337 640 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC013701.1-201ENST00000522657 465 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC188H7C350 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC188H7C350 AC025918.2-201ENST00000558683 763 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 SNORD95-201ENST00000579879 68 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 MIR4691-201ENST00000583764 85 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC091178.1-203ENST00000584586 279 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 ZNF92P2-201ENST00000600543 1059 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AP001521.2-201ENST00000608772 546 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AL353726.1-201ENST00000614041 1000 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 MIR7154-201ENST00000620673 73 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC015726.3-201ENST00000624501 418 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC188H7C350 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 AC091046.3-201ENST00000631455 1574 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 BTBD10P1-201ENST00000549824 1352 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 AC104118.1-201ENST00000607625 1589 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 Y_RNA.110-201ENST00000363220 99 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AP002530.1-201ENST00000405705 684 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 OR3A2-201ENST00000408891 1076 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 RN7SKP216-201ENST00000411050 312 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 XKRYP4-201ENST00000414395 483 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AL513325.1-201ENST00000417716 1034 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 MTCO3P21-201ENST00000430791 643 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 MTCO1P52-201ENST00000433928 531 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 XKRYP5-201ENST00000449659 483 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 RPL7AP28-201ENST00000464513 571 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 RPS26P28-201ENST00000470806 348 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 NPM1P17-201ENST00000479221 602 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 RN7SL809P-201ENST00000482040 297 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC188H7C350 AC093890.1-201ENST00000502554 540 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 MRPS33P2-201ENST00000507850 322 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 RNA5SP362-201ENST00000516048 118 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 RNA5SP228-201ENST00000516232 133 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AL136520.1-202ENST00000555494 763 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 AC022726.1-201ENST00000587475 207 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 RPL26P30-202ENST00000602923 645 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 IMMP1LP3-201ENST00000604197 224 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC188H7C350 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AP006248.3-201ENST00000623580 594 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 CIR1P2-201ENST00000514821 1342 ntBASIC4.88□□□□□ -1.63
CCDC188H7C350 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC188H7C350 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC188H7C350 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC188H7C350 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC188H7C350 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC188H7C350 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC188H7C350 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC188H7C350 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC188H7C350 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC188H7C350 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC188H7C350 RNA5SP28-201ENST00000363841 119 ntBASIC4.87□□□□□ -1.63
CCDC188H7C350 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC188H7C350 MIR92A2-201ENST00000385299 75 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms