Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL845331.3-202ENST00000562856 261 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL078601.3-201ENST00000573303 535 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC004232.2-201ENST00000574245 821 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 RBM22P1-201ENST00000578589 1214 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR4330-201ENST00000579077 105 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC100832.2-201ENST00000582080 776 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AP001180.3-201ENST00000582221 145 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC128687.2-201ENST00000609657 566 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC099778.2-201ENST00000610904 211 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 RNVU1-4-201ENST00000612985 164 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL589935.2-201ENST00000616471 1231 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AL049536.1-201ENST00000625043 744 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC138649.5-201ENST00000637456 137 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AC124944.3-204ENST00000641191 150 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 SPATA2P1-201ENST00000431223 2055 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 SLC2A3P2-201ENST00000331747 1480 ntBASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.38□□□□□ -2.03
CHKB-CPT1BH3BT56 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR375-201ENST00000362103 64 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR133B-201ENST00000362210 119 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU1-63P-201ENST00000383902 164 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ATP5HP3-201ENST00000396994 486 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 OR7E101P-201ENST00000400428 513 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 Z98745.1-201ENST00000402553 494 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 HMGB1P20-201ENST00000402555 677 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 OR4K12P-201ENST00000406538 961 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC017079.2-201ENST00000416102 485 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 VN1R96P-201ENST00000446052 858 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 RPL23AP43-201ENST00000446445 471 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 FAR2P1-206ENST00000449736 709 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL93P-201ENST00000463035 293 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC090142.1-201ENST00000465776 462 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 TRIM36-IT1-201ENST00000503723 881 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 PHBP14-201ENST00000512887 367 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORA43.3-201ENST00000517240 103 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC002519.2-203ENST00000567043 837 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AL121932.1-201ENST00000605542 214 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC018816.2-201ENST00000621460 353 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC117503.3-201ENST00000623811 601 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC048347.1-201ENST00000624621 427 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORA50A-202ENST00000629536 136 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 NXPH1-205ENST00000602349 1953 ntBASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 USP8P1-201ENST00000494673 3183 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms