Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL139395.1-201ENST00000603662 160 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL158196.1-201ENST00000616786 434 ntBASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM49D1C9J1S8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 BMS1P3-201ENST00000372011 932 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC097374.1-203ENST00000400783 485 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL109941.1-201ENST00000401925 229 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL645733.1-201ENST00000402250 217 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC233289.1-201ENST00000403700 508 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC008072.1-201ENST00000434254 824 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 SNRPFP2-201ENST00000440710 251 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 RPL36AP15-201ENST00000444514 266 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL589765.3-201ENST00000446084 462 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 RPL7P61-201ENST00000451721 751 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 RPL12P20-201ENST00000475538 479 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AP001960.1-201ENST00000506494 658 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 OR7H2P-201ENST00000513483 306 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 UBTFL9-201ENST00000534504 1148 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 OR1F2P-201ENST00000570470 933 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 MIR4646-201ENST00000580775 63 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC024940.4-201ENST00000605507 246 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AL133406.3-201ENST00000606817 541 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC138907.10-201ENST00000623708 983 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM49D1C9J1S8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM49D1C9J1S8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM49D1C9J1S8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AL161631.1-201ENST00000417933 486 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AL590762.4-201ENST00000425885 253 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 ELOCP8-201ENST00000439309 332 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 ELOCP15-201ENST00000442090 332 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC239798.3-201ENST00000454459 408 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RPL7AP10-201ENST00000481016 791 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC231760.1-201ENST00000498002 260 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RPS27AP18-201ENST00000515536 459 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RN7SKP5-201ENST00000517045 272 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AP002981.1-201ENST00000517692 975 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC084759.1-201ENST00000561168 290 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AP002884.5-201ENST00000595053 1132 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC087468.1-201ENST00000604365 630 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AL133243.1-201ENST00000614487 366 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 AC007546.1-201ENST00000619452 559 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 ZNF962P-201ENST00000443465 3140 ntBASIC4.33□□□□□ -1.72
TRIM49D1C9J1S8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms