Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 PEX12P1-201ENST00000400284 1048 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL592310.1-201ENST00000414330 671 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC107081.1-201ENST00000414975 361 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL606490.7-201ENST00000433136 191 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL359265.2-201ENST00000434367 631 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 SETD6P1-201ENST00000444575 317 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 RN7SL41P-201ENST00000476144 297 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 MRPS33P2-201ENST00000507850 322 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 RN7SKP122-201ENST00000515923 296 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC023824.3-201ENST00000569003 562 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC090666.1-201ENST00000578241 445 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC245036.5-201ENST00000596330 847 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC009237.13-201ENST00000603193 276 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AP001521.2-201ENST00000608772 546 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 MIR1264-201ENST00000616374 69 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL121890.2-201ENST00000617644 465 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AP003485.2-201ENST00000623636 610 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC021106.3-201ENST00000623925 531 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 OR52H1-202ENST00000641796 1061 ntBASIC4.99□□□□□ -1.61
C4orf47A7E2U8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
C4orf47A7E2U8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC009962.1-201ENST00000567327 3813 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 RNU6-1251P-201ENST00000364502 107 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 U3.22-201ENST00000391120 215 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 EI24P3-201ENST00000399046 1062 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AL021331.1-201ENST00000402817 582 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 RN7SKP100-201ENST00000411258 284 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 OR51B3P-201ENST00000412287 913 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AL158827.1-201ENST00000416300 391 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 GNG5P5-201ENST00000420444 220 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 TCEA1P2-201ENST00000420496 906 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 ARL2BPP3-201ENST00000421226 480 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 CHIAP3-201ENST00000423668 1133 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC013262.1-201ENST00000426710 252 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC004975.1-201ENST00000428733 208 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 TXNL1P1-201ENST00000429528 554 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC007563.3-201ENST00000433233 371 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 NDUFB4P8-201ENST00000435351 367 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 LINC02210-201ENST00000444561 288 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC023271.1-201ENST00000445936 1090 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 EIF2S2P2-201ENST00000447161 982 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 BUD31P2-201ENST00000449374 300 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 SNORD125-201ENST00000459538 96 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AP000563.1-201ENST00000490865 758 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC093824.1-201ENST00000508796 343 ntBASIC4.98□□□□□ -1.61
C4orf47A7E2U8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms