Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC113403.1-201ENST00000604910 193 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC025175.1-201ENST00000606482 759 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 Mico1.1-201ENST00000611698 204 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC064801.1-201ENST00000612025 407 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 uc_338.13-201ENST00000618243 179 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC002044.3-201ENST00000623314 541 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC008013.2-202ENST00000637965 364 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC090017.1-201ENST00000548612 1779 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC005332.5-201ENST00000591222 2919 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 SNORA58B-201ENST00000364259 136 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 RHOT1P2-201ENST00000366423 333 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL607077.1-201ENST00000401718 499 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL356387.2-201ENST00000422272 243 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC011998.1-201ENST00000433403 117 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 PHBP16-201ENST00000446318 950 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL513533.1-201ENST00000453728 415 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 MTND2P28-201ENST00000457540 1044 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 RN7SL610P-201ENST00000463845 291 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 RPL5P30-201ENST00000465511 891 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 RN7SL585P-201ENST00000470538 280 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC017037.1-201ENST00000508460 471 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC008638.3-201ENST00000603341 463 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC015922.4-201ENST00000612568 690 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC244517.3-201ENST00000616254 1235 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC009237.17-201ENST00000618111 748 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 MIR7703-201ENST00000620784 77 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AL445363.3-201ENST00000623080 671 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 AC140479.6-201ENST00000633535 357 ntBASIC3.84□□□□□ -1.79
TRAV27A0A087WT01 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 Z82217.1-201ENST00000625157 8149 ntBASIC3.84□□□□□ -1.8
TRAV27A0A087WT01 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC079741.1-201ENST00000321498 212 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RNVU1-6-201ENST00000364688 164 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RNA5SP505-201ENST00000364748 108 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 MIR129-1-201ENST00000384972 72 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RPS16P5-201ENST00000406501 404 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 SNORA11F-201ENST00000408237 128 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AP000357.1-201ENST00000409926 1165 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AL139128.1-201ENST00000413921 941 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RANP7-201ENST00000418085 644 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RPL23AP1-201ENST00000428990 471 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 ELOCP18-201ENST00000434209 337 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 PTMAP3-201ENST00000447474 330 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RPL7L1P1-201ENST00000448259 785 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 RPS29P19-201ENST00000479709 171 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC111000.3-201ENST00000508057 576 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 OR8G5-201ENST00000524943 1041 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 UBTFL9-201ENST00000534504 1148 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC051619.2-201ENST00000559063 397 ntBASIC3.83□□□□□ -1.8
TRAV27A0A087WT01 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms