Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 SETP5-201ENST00000437270 562 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 SUMO2P3-201ENST00000438311 288 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 TXNP2-201ENST00000443918 295 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL845321.1-201ENST00000444603 348 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 IGHV5-78-201ENST00000450948 295 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LDHBP2-201ENST00000456969 1005 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RPS4XP22-201ENST00000480755 780 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SL97P-201ENST00000486780 299 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SL776P-201ENST00000493390 268 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 GTF2F2P1-201ENST00000511083 675 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC007016.1-201ENST00000512110 244 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RNU6-347P-201ENST00000516658 105 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 HMGB1P40-201ENST00000525121 540 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 GNRHR2P1-201ENST00000555315 631 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC121758.1-202ENST00000556917 658 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC010680.4-201ENST00000605334 543 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 BX005040.2-201ENST00000620504 370 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 MIR6754-201ENST00000621121 66 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL122023.1-201ENST00000622847 530 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AC132068.1-201ENST00000623805 459 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL773545.4-201ENST00000637262 310 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL513478.4-201ENST00000641636 310 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 CASC19-264ENST00000641912 1184 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 AL391684.1-202ENST00000641293 1636 ntBASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01558Q9Y6Z2 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC135352.1-201ENST00000506173 1418 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AL138847.1-201ENST00000258651 546 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 SNORA73.2-201ENST00000364946 201 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RNU6-805P-201ENST00000365643 106 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 SNORA57.3-201ENST00000411095 141 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AL161742.1-201ENST00000418154 584 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC108075.1-201ENST00000424692 529 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 CICP10-201ENST00000439497 198 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 NANOGP10-201ENST00000453325 895 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC087312.1-201ENST00000471411 480 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC116562.1-201ENST00000485355 781 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC021146.5-201ENST00000503544 545 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC010374.1-201ENST00000503762 1237 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC092349.1-201ENST00000504903 310 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 PCBP2P3-201ENST00000509726 843 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC018797.1-201ENST00000510791 255 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 ZNF519P4-201ENST00000514008 125 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 MINOS1P4-201ENST00000515470 318 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SKP83-201ENST00000516512 178 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RNU6-943P-201ENST00000516960 98 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RNA5SP380-201ENST00000517190 98 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SKP289-201ENST00000517244 295 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 IGKV2OR22-4-201ENST00000523309 367 ntBASIC2.19□□□□□ -2.06
LINC01558Q9Y6Z2 AP003396.4-201ENST00000527574 265 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms