Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPS15AP1-201ENST00000457423 391 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-329P-201ENST00000459618 107 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL325P-201ENST00000460434 283 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RPL31P50-201ENST00000471002 296 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AL591122.1-201ENST00000487348 492 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 UBA52P3-201ENST00000491303 382 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 TMEM251P1-201ENST00000503717 318 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNU4-49P-201ENST00000516080 140 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-714P-201ENST00000516963 103 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 HSPE1P3-201ENST00000559254 309 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC026458.1-201ENST00000564330 438 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 MIR5682-201ENST00000584864 76 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RPS27AP19-201ENST00000597285 458 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC019257.2-201ENST00000605539 497 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC104184.1-201ENST00000607513 721 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC018690.1-201ENST00000608144 626 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC015712.7-201ENST00000615211 635 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC140479.4-205ENST00000636339 820 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 AC007603.3-201ENST00000636915 979 ntBASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 AC066616.2-201ENST00000559334 1481 ntBASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
PCDHB11Q9Y5F2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC092821.2-201ENST00000545710 2042 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPL23AP57-201ENST00000332361 466 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 MIR369-201ENST00000362155 70 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RNU6-1017P-201ENST00000363613 106 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 SNORA70.5-201ENST00000365519 135 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPL5P18-201ENST00000406671 891 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RNA5SP280-201ENST00000411230 115 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 TPMTP2-201ENST00000414372 726 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AL807761.1-201ENST00000417622 171 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC019097.1-201ENST00000424783 735 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC009518.3-201ENST00000438972 253 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPS15AP9-201ENST00000439856 381 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC064862.5-201ENST00000440618 334 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 FAM103A2P-201ENST00000444122 354 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AL022237.1-201ENST00000446663 358 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC004980.3-201ENST00000447046 365 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 PRDX1P1-201ENST00000449329 596 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPL31P11-202ENST00000454082 372 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPL37P3-201ENST00000456825 293 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 SNORA81.1-201ENST00000458922 177 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC233702.1-201ENST00000482905 502 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RPS4XP18-201ENST00000495480 763 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 EIF4EP3-201ENST00000498782 656 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC021146.2-201ENST00000504736 556 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC093677.1-201ENST00000514414 678 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RNU6-1046P-201ENST00000516538 107 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AP001803.1-201ENST00000525668 147 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC138207.8-204ENST00000579588 527 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC006006.1-201ENST00000603082 144 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RBPJP7-201ENST00000442803 1447 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 RBPJP5-201ENST00000449433 1447 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AC022507.1-201ENST00000548349 1505 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 OR4G1P-203ENST00000641984 1631 ntBASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms