Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC123769.2-201ENST00000624332 5984 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC008498.2-201ENST00000624033 2322 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RNU6-212P-201ENST00000362642 104 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RNU6-657P-201ENST00000383904 107 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RPS3AP5-201ENST00000389400 821 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RNA5SP198-201ENST00000410376 127 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC108032.1-201ENST00000416706 207 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RBMY1KP-201ENST00000423480 476 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RPL23AP34-201ENST00000423483 410 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AL137074.1-201ENST00000442640 465 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AL935212.3-201ENST00000450729 284 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RNU7-182P-201ENST00000459009 62 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 RPS3AP41-201ENST00000462701 778 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AP001025.2-201ENST00000490908 477 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC008526.1-201ENST00000509149 338 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 OR4H6P-201ENST00000563771 921 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 MIR4642-201ENST00000583943 82 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC135068.11-201ENST00000636378 921 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC245505.2-201ENST00000553572 3055 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 MAPK10-377ENST00000642006 2752 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC010886.1-201ENST00000437380 2869 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 KYNUP1-201ENST00000466683 1406 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RNU6-251P-201ENST00000363235 104 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 Y_RNA.214-201ENST00000364201 112 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 CST13P-201ENST00000376992 428 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 SNORA68-201ENST00000384437 133 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 MIR548H3-201ENST00000408771 118 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 VDAC2P3-201ENST00000430995 828 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RPS6P12-201ENST00000432491 726 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC243772.1-201ENST00000451620 410 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 PSMC1P13-201ENST00000458195 985 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 CTSLP6-201ENST00000458273 1002 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC096922.1-201ENST00000461635 651 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AL049714.1-201ENST00000466686 347 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RN7SL233P-201ENST00000469988 277 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RPL31P50-201ENST00000471002 296 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC005550.2-201ENST00000476382 318 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RN7SL153P-201ENST00000486501 292 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 RN7SL635P-201ENST00000492123 296 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AL035404.1-201ENST00000497982 568 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AC009901.1-201ENST00000506703 541 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 MIR4793-201ENST00000577502 87 ntBASIC7.55□□□□□ -1.2
VPS9D1Q9Y2B5 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms