Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-193P-201ENST00000410977 107 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL158073.1-201ENST00000426848 1104 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC009518.3-201ENST00000438972 253 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC092601.1-201ENST00000444526 383 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC002486.2-201ENST00000447806 590 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC009244.1-201ENST00000450566 258 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 SLC25A51P1-201ENST00000468432 871 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-583P-201ENST00000516012 92 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 RNU6-1088P-201ENST00000516850 104 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 EEF1B2P2-201ENST00000519625 676 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC022360.1-201ENST00000521058 340 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AP001804.3-201ENST00000525146 880 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC007537.1-201ENST00000539347 327 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC022080.3-201ENST00000544433 482 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC009729.1-201ENST00000548873 1133 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC023310.2-201ENST00000553844 547 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 RN7SL42P-201ENST00000579786 294 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 AC124045.1-201ENST00000606008 1953 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 ZNF812P-201ENST00000457674 1694 ntBASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
TRIM35Q9UPQ4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-619P-201ENST00000365146 108 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 Y_RNA.461-201ENST00000384263 103 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-713P-201ENST00000384761 107 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MIR199B-201ENST00000384849 110 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AL139397.2-201ENST00000404529 772 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RN7SKP91-201ENST00000410852 288 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MTCO1P27-201ENST00000448269 226 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 GSTA11P-201ENST00000452866 669 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 SBDSP1-204ENST00000453858 737 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AL356010.1-201ENST00000456364 102 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC022730.1-201ENST00000473114 568 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RPS14P8-201ENST00000478778 369 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RN7SL849P-201ENST00000485236 295 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RPL34P33-201ENST00000486062 334 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RN7SL655P-201ENST00000486087 298 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 SCARNA11.1-201ENST00000516918 132 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AL162632.2-201ENST00000553933 399 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC068831.4-201ENST00000556118 109 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 PPIAP6-201ENST00000557078 499 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 RPL21P7-201ENST00000557463 483 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AP005119.1-201ENST00000580956 292 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MIR3942-201ENST00000585264 109 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC078899.3-201ENST00000599065 212 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MIR6070-201ENST00000613967 103 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 TEX41-279ENST00000629149 609 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 OR52H1-202ENST00000641796 1061 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC015871.3-201ENST00000618835 2261 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC005592.1-201ENST00000566527 1640 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms