Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR1911-201ENST00000410783 80 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AL117339.2-201ENST00000430475 180 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 CEACAMP1-201ENST00000434624 1035 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AL162151.2-201ENST00000448875 158 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 VN1R105P-201ENST00000486595 910 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 SCARNA13-201ENST00000516672 275 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AC027455.1-201ENST00000574104 594 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 AL021997.2-201ENST00000615674 271 ntBASIC5.49□□□□□ -1.53
SCN11AQ9UI33 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
SCN11AQ9UI33 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 RLIMP1-201ENST00000339626 1680 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AL133268.1-201ENST00000405676 1401 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 SNORA71.3-201ENST00000362582 128 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 NPM1P37-201ENST00000403105 874 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AL078604.1-201ENST00000404609 466 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AP000357.1-201ENST00000409926 1165 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 RPS29P7-201ENST00000439662 171 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 SETP4-201ENST00000455717 868 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC090602.1-201ENST00000469695 252 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC026726.1-201ENST00000512859 601 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 IGKV2-23-201ENST00000518729 323 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC124068.1-201ENST00000563131 678 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 HNRNPCP4-201ENST00000571636 900 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MIR4472-2-201ENST00000582069 67 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MIR6875-201ENST00000617506 72 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC091905.2-201ENST00000623143 306 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC012442.3-202ENST00000636742 206 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 AC083837.1-201ENST00000565297 2994 ntBASIC5.48□□□□□ -1.53
SCN11AQ9UI33 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCN11AQ9UI33 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 RNU6-525P-201ENST00000363685 104 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC108032.1-201ENST00000416706 207 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC008280.1-201ENST00000418851 412 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 RPS4XP4-201ENST00000443195 763 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 RNA5SP497-201ENST00000516081 97 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 DYNLL1P4-201ENST00000549314 266 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 TVP23BP1-201ENST00000557500 617 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 RNU6-628P-201ENST00000410675 107 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC069157.1-201ENST00000421749 137 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 OR5BE1P-201ENST00000425977 939 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC079804.1-201ENST00000461922 436 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC120057.2-201ENST00000571520 271 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC024220.1-201ENST00000603675 484 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN11AQ9UI33 OR5BE1P-202ENST00000641168 1176 ntBASIC5.47□□□□□ -1.53
SCN11AQ9UI33 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.46□□□□□ -1.53
SCN11AQ9UI33 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN11AQ9UI33 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN11AQ9UI33 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SCN11AQ9UI33 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 RPS27AP15-201ENST00000447672 466 ntBASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AL445433.1-201ENST00000457507 257 ntBASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms