Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC008782.1-201ENST00000603386 430 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC005034.4-201ENST00000603612 899 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AL669942.2-201ENST00000620352 697 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC019278.1-201ENST00000623516 479 ntBASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
VPS29Q9UBQ0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 SNORA58B-201ENST00000364259 136 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 RBMY1KP-201ENST00000423480 476 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 MTND4LP12-201ENST00000448237 295 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AC073264.2-201ENST00000448886 166 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 ABCF2P2-201ENST00000450549 296 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 RPL35AP28-201ENST00000459730 331 ntBASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
VPS29Q9UBQ0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL592182.3-201ENST00000642132 3304 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL592148.3-201ENST00000608771 2646 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 RAD17P1-201ENST00000418130 2042 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR52B1P-201ENST00000316506 909 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC079741.1-201ENST00000321498 212 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL139128.1-201ENST00000413921 941 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 RPS23P10-201ENST00000416185 486 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 EIF4EP1-201ENST00000422311 642 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 MAPRE1P3-201ENST00000435438 796 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL772161.1-201ENST00000439130 476 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 RPL35AP15-201ENST00000468042 339 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR5BC1P-201ENST00000529327 739 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AP006289.1-201ENST00000538089 277 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC051619.2-201ENST00000559063 397 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC105036.1-201ENST00000566222 271 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 RN7SL176P-201ENST00000580352 264 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC115286.1-201ENST00000604298 434 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL353600.1-201ENST00000608148 251 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 FP325313.1-201ENST00000638228 703 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR51C1P-202ENST00000641159 1444 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 OR56B2P-202ENST00000641377 2453 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AL450326.2-201ENST00000421913 1962 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 AC107027.3-201ENST00000565095 3473 ntBASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS29Q9UBQ0 DDX18P3-201ENST00000404856 2007 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms