Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL603750.1-201ENST00000624216 1717 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-98P-201ENST00000384173 107 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-517P-201ENST00000384362 110 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-253P-201ENST00000384730 105 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 MIR16-1-201ENST00000385271 89 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 SNORD65.1-201ENST00000390889 71 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 OR7E101P-201ENST00000400428 513 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RN7SKP29-201ENST00000410957 272 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 GAPDHP49-201ENST00000421421 961 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 HMGB1P45-201ENST00000435986 653 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 Z74696.2-201ENST00000436514 498 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 HLA-DPA3-207ENST00000454398 229 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 BX248409.1-201ENST00000455497 255 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 SUMO2P2-201ENST00000456482 255 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-956P-201ENST00000458868 103 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 RPS17P15-201ENST00000475609 349 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC109486.1-201ENST00000486833 374 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 ACTG1P13-201ENST00000486987 1043 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL024509.2-201ENST00000493462 493 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AP000859.1-201ENST00000525536 307 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 HMGN2P36-201ENST00000529541 409 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 OR4C2P-201ENST00000530855 1064 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC090424.1-201ENST00000535243 736 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 MIR548Y-201ENST00000582739 110 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL390838.2-201ENST00000602394 274 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC103881.1-201ENST00000603476 538 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL136981.2-201ENST00000617319 734 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 OR11H2-202ENST00000641517 1085 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AL353743.4-201ENST00000422653 1547 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 AC027514.1-201ENST00000588561 1603 ntBASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PPARGC1AQ9UBK2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 MTND4P31-201ENST00000425607 1343 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 AL161756.3-201ENST00000641216 2071 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 AC005832.2-201ENST00000538921 1430 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 AC004076.2-201ENST00000620532 3323 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 MIR1282-201ENST00000408865 101 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 MTCO2P34-201ENST00000421994 607 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 IPPKP1-201ENST00000422501 768 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 NMNAT1P2-201ENST00000435192 860 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 PCNPP2-201ENST00000441651 455 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 MTCO1P19-201ENST00000443487 500 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 NPM1P49-201ENST00000448027 714 ntBASIC6.02□□□□□ -1.45
PPARGC1AQ9UBK2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms