Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 MTCO1P12-201ENST00000414273 1543 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 ZNF826P-207ENST00000622273 1910 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 UBE2V1P2-201ENST00000397758 440 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 MTCO1P45-201ENST00000431457 267 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 RAB28P3-201ENST00000448325 597 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ACTR3P3-201ENST00000480448 893 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 NPM1P21-201ENST00000513394 762 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC007991.1-201ENST00000522680 631 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC092821.2-201ENST00000545710 2042 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ANKRD36P1-201ENST00000344424 659 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 SNORA70H-201ENST00000383910 135 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 SNORA70J-201ENST00000384182 135 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ATP5G1P3-201ENST00000463301 410 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 RN7SL323P-201ENST00000494712 295 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC105233.3-201ENST00000531125 744 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 BPIFA4P-203ENST00000603168 689 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 YPEL5P2-201ENST00000605553 359 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 FAM27D1-201ENST00000612308 341 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 AC069542.2-201ENST00000624816 216 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 HSPD1P8-201ENST00000400121 1658 ntBASIC4.13□□□□□ -1.75
CHD8Q9HCK8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.13□□□□□ -1.75
CHD8Q9HCK8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 NDUFB4P8-201ENST00000435351 367 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC004980.3-201ENST00000447046 365 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 RN7SL807P-201ENST00000470923 297 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC004836.1-201ENST00000623032 634 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC073342.2-201ENST00000595842 1800 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 MIR490-201ENST00000384865 128 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 MRPS33P4-201ENST00000434892 317 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 ENPP7P11-201ENST00000505915 627 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 PGBD4P4-201ENST00000509673 613 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 AC010632.3-201ENST00000611377 369 ntBASIC4.12□□□□□ -1.75
CHD8Q9HCK8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.12□□□□□ -1.75
CHD8Q9HCK8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 RPL7P4-203ENST00000430239 730 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 BX510359.1-201ENST00000456973 237 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 MIR6500-201ENST00000622700 86 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
CHD8Q9HCK8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHD8Q9HCK8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms