Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 CASC19-204ENST00000641001 2055 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC131971.1-201ENST00000332881 1482 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 BTF3P9-201ENST00000418784 283 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 Z85994.2-201ENST00000434327 452 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC073648.4-201ENST00000442655 781 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 GEMIN8P3-201ENST00000445417 720 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AL935212.3-201ENST00000450729 284 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC091685.2-201ENST00000454924 864 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC010627.1-201ENST00000503819 1294 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 TCP11X3P-202ENST00000514289 1254 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC068446.3-201ENST00000555285 382 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC091178.1-203ENST00000584586 279 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC008966.2-201ENST00000606157 453 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AL133406.3-201ENST00000606817 541 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC005021.1-201ENST00000608730 355 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC090510.2-201ENST00000617465 629 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 MIR6853-201ENST00000619642 74 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC019080.5-201ENST00000624891 757 ntBASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRC40Q9H9A6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 DDX18P4-201ENST00000511690 1966 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 RNU6-532P-201ENST00000384318 107 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 RN7SKP278-201ENST00000410504 342 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC019050.1-201ENST00000418508 492 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 RPL12P34-201ENST00000424532 479 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 ISCUP1-201ENST00000454451 448 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 RPS3AP41-201ENST00000462701 778 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC104763.1-201ENST00000475274 360 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 GSTP1P1-201ENST00000548078 319 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC091042.1-201ENST00000579213 173 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 MIR3934-201ENST00000579806 107 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC020915.5-201ENST00000596836 964 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC211433.2-201ENST00000608433 387 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 MIR6719-201ENST00000622428 87 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AP003497.2-201ENST00000624220 967 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 OR51C1P-202ENST00000641159 1444 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AC114546.3-201ENST00000623582 1734 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRC40Q9H9A6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 AL445437.1-201ENST00000623157 3087 ntBASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 RNU4-23P-201ENST00000362839 140 ntBASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 SNORA71.2-201ENST00000364941 134 ntBASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 MIR320B1-201ENST00000390209 79 ntBASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRC40Q9H9A6 AC009237.10-201ENST00000414112 510 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms