Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 UBE2V1P5-201ENST00000440070 405 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC092647.3-201ENST00000443044 633 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 HMGB1P16-201ENST00000447155 540 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC007998.1-201ENST00000474156 672 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC090114.3-201ENST00000479267 829 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 RPL5P23-201ENST00000496040 868 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 NDUFB4P12-201ENST00000513465 390 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 C1GALT1P3-201ENST00000522049 819 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC112191.2-201ENST00000522428 333 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 MTND2P26-201ENST00000528255 1029 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AP001317.1-201ENST00000531194 960 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 NBEAP1-201ENST00000554452 979 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC010547.6-201ENST00000571789 193 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC124856.1-201ENST00000600819 896 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC010245.2-201ENST00000606908 1167 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC007490.1-201ENST00000624321 703 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 ATE1-AS1-202ENST00000636460 506 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 MIR1910-201ENST00000636955 80 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AP003399.1-201ENST00000637534 361 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 AC073869.8-201ENST00000641806 335 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 SGO1P1-201ENST00000603525 1447 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 MAPK10-328ENST00000641553 4009 ntBASIC5.38□□□□□ -1.55
TRIM54Q9BYV2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 SNORD113-6-201ENST00000363345 75 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 MIR16-1-201ENST00000385271 89 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC093719.1-202ENST00000392735 373 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RNU6-575P-201ENST00000411326 105 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RPSAP35-201ENST00000413753 818 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 Z93019.1-201ENST00000416450 973 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 BMS1P17-202ENST00000416720 316 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 TRGV6-201ENST00000417928 299 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 TNPO1P1-201ENST00000423641 1138 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 HMGN2P27-201ENST00000427352 270 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RPL7P4-203ENST00000430239 730 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RPL12P17-201ENST00000432393 498 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 OR6D1P-201ENST00000436165 939 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 GTF2IP7-202ENST00000436677 309 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC002504.1-201ENST00000438281 691 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 YWHAQP9-201ENST00000445891 512 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC234781.3-201ENST00000452540 973 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 ART2BP-201ENST00000453501 499 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 UBFD1P1-201ENST00000473259 814 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AP000797.2-201ENST00000475768 606 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC091912.1-201ENST00000511351 248 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC093755.1-201ENST00000512950 1023 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 IGKV2-36-201ENST00000519999 223 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AP003461.1-201ENST00000528866 78 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC087465.1-201ENST00000560574 245 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms