Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL513548.1-201ENST00000562904 1724 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 MFSD8-242ENST00000641690 4199 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 RNA5SP28-201ENST00000363841 119 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 RN7SL98P-201ENST00000462271 300 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC026402.1-201ENST00000513642 170 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 HMGB1P19-201ENST00000517578 577 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AP001160.4-201ENST00000596971 382 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC015849.6-201ENST00000605454 474 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 AC114781.5-201ENST00000615297 108 ntBASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RPAP1Q9BWH6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC006971.1-201ENST00000407916 4486 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 SNORA70C-201ENST00000384538 135 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 SNORA81-201ENST00000408493 178 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 RPL21P108-201ENST00000413857 481 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 TMSB10P2-201ENST00000416049 131 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 RPS27AP12-201ENST00000429552 465 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 RPS29P17-201ENST00000430795 166 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 FTH1P16-201ENST00000435241 552 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 RPL7P32-201ENST00000457119 744 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 RNU7-157P-201ENST00000459600 66 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC106806.2-201ENST00000509365 500 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 TCP11X3P-202ENST00000514289 1254 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 BPIFA4P-203ENST00000603168 689 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC067959.1-201ENST00000604334 379 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AL445567.2-201ENST00000618935 498 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AP003072.5-201ENST00000623872 773 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AL596275.2-204ENST00000641628 552 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AL596275.2-206ENST00000641957 626 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 AC025031.4-201ENST00000621248 3271 ntBASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
RPAP1Q9BWH6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 VDAC1P9-201ENST00000412766 841 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AP001324.1-201ENST00000428553 399 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 RPL7AP52-201ENST00000458096 790 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 MRPL49P2-201ENST00000521066 465 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 RN7SL176P-201ENST00000580352 264 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC091178.1-203ENST00000584586 279 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AL451049.1-201ENST00000608672 497 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 MIR6891-201ENST00000618788 93 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms