Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP88Q99567 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC019322.1-201ENST00000571869 389 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP88Q99567 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC010503.3-201ENST00000594355 540 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AL357094.1-201ENST00000603845 844 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC011626.1-201ENST00000604710 562 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 FAM25E-202ENST00000608562 189 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AL353662.3-201ENST00000625131 237 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 LINC01808-202ENST00000641680 1116 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 RN7SKP103-201ENST00000363848 320 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 TAS2R15P-201ENST00000390674 928 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 RNA5SP241-201ENST00000391326 114 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 RN7SKP114-201ENST00000410327 279 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 PCNPP4-201ENST00000414817 517 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 AC104837.2-201ENST00000427236 424 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AC124944.2-201ENST00000429866 1242 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.02□□□□□ -1.45
NUP88Q99567 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 ZNF886P-201ENST00000450781 723 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 RPS3AP41-201ENST00000462701 778 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 MTCO3P35-201ENST00000485582 781 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC008565.1-201ENST00000509046 885 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC083923.1-201ENST00000523708 376 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 MTND3P12-201ENST00000559068 328 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 RN7SL290P-201ENST00000578661 300 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP88Q99567 VN1R74P-201ENST00000613259 503 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AC091953.3-201ENST00000623220 236 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 U6.107-201ENST00000637108 79 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP88Q99567 AC100871.1-201ENST00000507871 1456 ntBASIC6.02□□□□□ -1.45
NUP88Q99567 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP88Q99567 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP88Q99567 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 AL355578.1-201ENST00000607405 1328 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 AC093311.1-201ENST00000506586 2021 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NUP88Q99567 IGKV7-3-201ENST00000357453 298 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 RNU6-98P-201ENST00000384173 107 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 RNU6-225P-201ENST00000384613 103 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 MIR589-201ENST00000385238 99 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AL021331.1-201ENST00000402817 582 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 RN7SKP97-201ENST00000410966 333 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 XKRYP1-201ENST00000423438 492 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms