Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AP001823.1-201ENST00000604056 1003 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 TAS2R6P-201ENST00000605022 826 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC010857.1-201ENST00000606398 594 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AL354760.1-201ENST00000608357 643 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC023509.5-201ENST00000617434 807 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AL121890.2-201ENST00000617644 465 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC073593.1-201ENST00000624500 411 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC015726.3-201ENST00000624501 418 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC027575.3-201ENST00000583058 2747 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 AC034229.2-201ENST00000566945 2508 ntBASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
PTCHD1Q96NR3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 CDC27P2-201ENST00000425026 1922 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OR5BR1P-201ENST00000524992 1330 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 RNU6-582P-201ENST00000362989 107 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 RN7SKP263-201ENST00000411194 309 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 HMGN1P14-201ENST00000412459 517 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 NME1P1-201ENST00000420914 382 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC062016.2-201ENST00000420950 676 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 B3GNT2P1-201ENST00000434960 952 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 TXNP5-201ENST00000441043 315 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC092809.1-201ENST00000441469 474 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC244505.5-201ENST00000443639 207 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC112653.1-201ENST00000443851 386 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 MTND5P20-201ENST00000448677 143 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 RN7SL170P-201ENST00000487098 295 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC109462.1-201ENST00000491087 368 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 RPL17P2-201ENST00000491913 451 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 Y_RNA.702-201ENST00000516843 96 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC107958.1-201ENST00000556576 290 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC124916.2-201ENST00000604416 224 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AL080312.2-201ENST00000613001 630 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 AC068870.3-201ENST00000625077 2536 ntBASIC5.84□□□□□ -1.47
PTCHD1Q96NR3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.84□□□□□ -1.48
PTCHD1Q96NR3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.84□□□□□ -1.48
PTCHD1Q96NR3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.48
PTCHD1Q96NR3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms