Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC012020.1-201ENST00000624541 1728 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 SNORD74.4-201ENST00000364129 80 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 GCNT6-201ENST00000379591 934 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 MIR1178-201ENST00000408396 91 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 RN7SKP106-201ENST00000410832 272 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 TRIM60P17-201ENST00000415181 719 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC004552.1-201ENST00000419089 348 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 AL132765.1-201ENST00000434165 553 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 ELOCP18-201ENST00000434209 337 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AL121877.1-201ENST00000453704 622 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 RPL35AP15-201ENST00000468042 339 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 RPS26P3-201ENST00000470205 348 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 RN7SL585P-201ENST00000470538 280 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC090543.2-201ENST00000483963 348 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC004057.1-201ENST00000485827 348 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC017037.1-201ENST00000508460 471 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 OR51K1P-201ENST00000510214 950 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 VWA8P1-201ENST00000510889 176 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AP000827.1-201ENST00000527814 258 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 UBTFL9-201ENST00000534504 1148 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 MIR3934-201ENST00000579806 107 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC133644.2-201ENST00000608142 540 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC138907.10-201ENST00000623708 983 ntBASIC4.67□□□□□ -1.66
CCDC42Q96M95 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC42Q96M95 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC42Q96M95 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC016588.2-201ENST00000632484 3021 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 SNORA11.3-201ENST00000408471 128 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AL353748.1-201ENST00000440753 474 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AL162591.2-201ENST00000449634 317 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 RPS3AP41-201ENST00000462701 778 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 RPL7P22-201ENST00000466005 733 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC093270.2-201ENST00000486157 792 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC108145.1-201ENST00000503770 153 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 MTCYBP19-201ENST00000517463 1124 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 IGHV3-63-201ENST00000518422 341 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 SNORA11.6-201ENST00000619030 128 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 AP003499.2-201ENST00000624100 483 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 CR788268.1-201ENST00000603931 1809 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 CIR1P2-201ENST00000514821 1342 ntBASIC4.66□□□□□ -1.66
CCDC42Q96M95 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC42Q96M95 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC42Q96M95 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC42Q96M95 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC42Q96M95 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC42Q96M95 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.65□□□□□ -1.66
CCDC42Q96M95 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC42Q96M95 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC42Q96M95 AC093535.2-201ENST00000624769 2326 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms