Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 MTND4P10-201ENST00000446199 1363 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 CCT8P1-201ENST00000413611 1657 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 RNU6-353P-201ENST00000364266 108 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 RN7SKP6-201ENST00000364795 319 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC009804.1-201ENST00000400949 179 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL359643.1-201ENST00000404109 423 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 RN7SKP59-201ENST00000410520 314 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 HIGD1AP12-201ENST00000427832 281 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC068135.1-201ENST00000446164 246 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 OR52E3P-201ENST00000452083 936 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC011037.1-201ENST00000483964 558 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC073610.1-201ENST00000489971 396 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 RN7SL447P-201ENST00000494711 245 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC091515.1-201ENST00000548110 679 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AGGF1P7-201ENST00000562369 913 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC015688.2-201ENST00000584523 262 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC091057.2-201ENST00000602594 792 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC013444.2-201ENST00000603317 787 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL138478.1-201ENST00000612252 832 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC091304.6-201ENST00000619761 202 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC112694.2-201ENST00000623697 768 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC074101.1-201ENST00000637861 241 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 CASC19-264ENST00000641912 1184 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 AC006206.1-201ENST00000544842 3387 ntBASIC5.28□□□□□ -1.56
VPS50Q96JG6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VPS50Q96JG6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS50Q96JG6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS50Q96JG6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS50Q96JG6 ZNF876P-202ENST00000398732 1485 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS50Q96JG6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 ANKRD36P1-201ENST00000344424 659 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS50Q96JG6 RN7SKP162-201ENST00000363605 345 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS50Q96JG6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 DNAJC19P6-201ENST00000401853 280 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 MIR1286-201ENST00000408112 78 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 AL356320.2-201ENST00000417263 507 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 HIGD1AP4-201ENST00000430194 280 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 MOB1AP1-201ENST00000430903 535 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 YWHAEP5-201ENST00000431545 765 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS50Q96JG6 AC084290.1-201ENST00000434995 374 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 CACYBPP1-201ENST00000438592 684 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 EEF1A1P39-201ENST00000440791 250 ntBASIC5.27□□□□□ -1.57
VPS50Q96JG6 AC092685.1-201ENST00000447960 1243 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms