Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 AL049737.1-201ENST00000413920 1403 ntBASIC4.79□□□□□ -1.64
VPS33AQ96AX1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS33AQ96AX1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC007529.1-201ENST00000418574 2178 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 PANDAR-201ENST00000629595 1506 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC019155.1-201ENST00000382242 574 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 SNORA67-201ENST00000384423 137 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RPL23AP59-201ENST00000399415 461 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RPS24P12-201ENST00000402084 394 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 ATF1P1-201ENST00000406040 927 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 MIR1303-201ENST00000408625 86 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 SNORA77-201ENST00000408716 125 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 CYCSP10-201ENST00000417973 294 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 HMGB3P21-201ENST00000452483 547 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RPL32P14-201ENST00000463196 378 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RN7SL799P-201ENST00000475891 298 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RN7SL184P-201ENST00000488308 297 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AL035404.1-201ENST00000497982 568 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC083923.1-201ENST00000523708 376 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 SOX5P1-201ENST00000524155 1127 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 OR4A2P-201ENST00000527276 913 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC020978.7-201ENST00000575953 1187 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 RN7SL52P-201ENST00000584271 284 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC015911.5-201ENST00000587076 451 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 PCNAP1-202ENST00000595299 752 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC098483.2-201ENST00000603158 454 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC093765.1-201ENST00000603758 881 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC097505.1-201ENST00000610199 565 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AC073569.3-201ENST00000619055 682 ntBASIC4.78□□□□□ -1.64
VPS33AQ96AX1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS33AQ96AX1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
VPS33AQ96AX1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 ENSAP3-201ENST00000312710 333 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 U3.2-201ENST00000362981 210 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 SNORA70.10-201ENST00000384515 134 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 SLC35E1P1-201ENST00000419313 864 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC073587.1-201ENST00000447093 876 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC008379.1-201ENST00000463655 464 ntBASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS33AQ96AX1 AC020890.1-201ENST00000491837 504 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms