Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.96□□□□□ -1.93
ALMS1Q8TCU4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
ALMS1Q8TCU4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 OR52E3P-201ENST00000452083 936 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 EIF2S2P5-201ENST00000457635 968 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AP005262.1-201ENST00000582646 997 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ADAD1P2-201ENST00000588476 646 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 CASC19-204ENST00000641001 2055 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SNORA70.6-201ENST00000383934 134 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 RNU11-4P-201ENST00000391149 133 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 EIF3EP2-201ENST00000423042 1814 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 OR8F1P-201ENST00000425243 930 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 HSPE1P16-201ENST00000426640 348 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC110768.1-201ENST00000509222 400 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 RN7SL435P-201ENST00000584418 282 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AL133243.3-201ENST00000617415 3004 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AL359643.1-201ENST00000404109 423 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AL590806.1-201ENST00000415818 853 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 OR5BE1P-201ENST00000425977 939 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC007967.1-201ENST00000455422 1159 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC010201.1-201ENST00000605051 540 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 AC243756.2-201ENST00000618406 463 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 MIR7975-201ENST00000619350 68 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 OR5BE1P-202ENST00000641168 1176 ntBASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ALMS1Q8TCU4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC093591.2-201ENST00000565254 3843 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ABCF2P2-201ENST00000450549 296 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 PARP4P3-201ENST00000510265 317 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC105233.3-201ENST00000531125 744 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC084757.4-201ENST00000616350 526 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AL357559.1-201ENST00000622228 274 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AP000907.1-201ENST00000428428 510 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms