Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC108463.1-201ENST00000450258 347 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 SCARNA10-201ENST00000459255 330 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 IGLV2-34-201ENST00000490007 283 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 RPS27AP18-201ENST00000515536 459 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC063949.1-201ENST00000552900 865 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC124856.1-201ENST00000600819 896 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC103858.2-201ENST00000621471 543 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC006840.1-201ENST00000623069 542 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC012618.3-205ENST00000637896 1496 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 AC012020.1-201ENST00000624541 1728 ntBASIC4.92□□□□□ -1.62
CCDC112Q8NEF3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC097523.2-201ENST00000435551 652 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CYCSP11-201ENST00000436426 315 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 TPT1P13-201ENST00000449760 499 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 RPL7AP10-201ENST00000481016 791 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 SYT14P1-201ENST00000481459 721 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 SCARNA22-201ENST00000503991 125 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 GAPDHP56-201ENST00000506031 988 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC008033.2-201ENST00000542626 177 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AC105129.1-201ENST00000560250 297 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 MIR4330-201ENST00000579077 105 ntBASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC112Q8NEF3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.9□□□□□ -1.62
CCDC112Q8NEF3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.9□□□□□ -1.62
CCDC112Q8NEF3 AC125257.1-201ENST00000560400 2930 ntBASIC4.9□□□□□ -1.62
CCDC112Q8NEF3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC112Q8NEF3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC112Q8NEF3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RN7SKP95-201ENST00000362860 303 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RNA5SP87-201ENST00000384155 118 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RN7SL205P-201ENST00000490174 284 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 OR9N1P-201ENST00000491296 333 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 CEACAMP10-202ENST00000495431 496 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC112184.1-201ENST00000505179 312 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RFPL4AP3-201ENST00000515267 345 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AF186190.1-201ENST00000517470 480 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC090281.1-201ENST00000523019 276 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 MORF4L1P3-201ENST00000525966 950 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 PHBP17-201ENST00000528576 541 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC008147.3-201ENST00000548666 354 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 BGLT3-201ENST00000564523 994 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RN7SL722P-201ENST00000617780 284 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 RN7SL565P-201ENST00000618246 284 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AP001005.3-201ENST00000622049 129 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC018555.1-201ENST00000567548 1980 ntBASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCDC112Q8NEF3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms