Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC093414.1-201ENST00000434712 514 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AL138899.2-201ENST00000439139 499 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AL161636.2-201ENST00000445179 927 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 ZFRP1-201ENST00000457579 2970 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 ATP5G1P3-201ENST00000463301 410 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 RPS26P28-201ENST00000470806 348 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SL319P-201ENST00000480656 221 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC025164.1-201ENST00000496249 478 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 COL6A4P2-205ENST00000509855 506 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 GLRXP2-201ENST00000555594 321 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC015912.2-201ENST00000571053 181 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC091178.1-203ENST00000584586 279 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC008759.1-201ENST00000589783 983 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC091979.2-201ENST00000607514 214 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC078899.5-201ENST00000612475 178 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AL355852.1-201ENST00000454081 1771 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 AL133412.1-201ENST00000380194 2992 ntBASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC71LQ8N9Z2 KPNA2P2-201ENST00000419546 1489 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC009501.3-201ENST00000605001 1352 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP183-201ENST00000362452 119 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 GCNT6-201ENST00000379591 934 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 CCNB2P1-201ENST00000399411 1150 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL589647.1-201ENST00000402485 466 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 DUTP5-201ENST00000406790 469 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SKP216-201ENST00000411050 312 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AF186996.5-201ENST00000418098 904 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RPS26P13-201ENST00000419030 330 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00993-201ENST00000420453 540 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 OR6K4P-201ENST00000423179 955 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RPL7P57-201ENST00000423238 740 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 ZFAND6P1-201ENST00000434138 605 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 MTCO3P43-201ENST00000440974 771 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL645939.1-201ENST00000453429 797 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 SCARNA10-201ENST00000459255 330 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 NDUFA5P5-201ENST00000468361 342 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SL184P-201ENST00000488308 297 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 PFN1P8-201ENST00000497012 543 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC093770.1-201ENST00000511559 571 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC108471.1-201ENST00000513977 287 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC135001.1-201ENST00000544546 283 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC068714.1-201ENST00000559623 800 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 RPL7P50-201ENST00000600588 727 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC010680.3-201ENST00000604215 520 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC010200.2-201ENST00000605098 235 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL355802.4-201ENST00000607635 548 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AL391834.1-201ENST00000609609 560 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 MIR6780B-201ENST00000610307 79 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms