Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC005332.9-201ENST00000620266 2921 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC092079.1-201ENST00000558620 1985 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC097714.1-201ENST00000511272 1647 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RIOK3P1-201ENST00000418778 1528 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RNA5SP218-201ENST00000363188 109 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC016769.3-201ENST00000396562 315 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 TXNP7-201ENST00000406296 293 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 MTCO3P12-201ENST00000416718 547 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AL353678.1-201ENST00000422735 741 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC137499.1-201ENST00000427602 88 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AL137074.1-201ENST00000442640 465 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 DDX3P2-201ENST00000446138 111 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RNU7-63P-201ENST00000459054 62 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL338P-201ENST00000481467 293 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RPS15AP36-201ENST00000492022 382 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RPS4XP14-201ENST00000493072 781 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC092332.1-201ENST00000563684 829 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL786P-201ENST00000579130 298 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC010525.2-201ENST00000590920 195 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 HSPE1P14-201ENST00000605812 302 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DEPDC4Q8N2C3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC010401.2-201ENST00000575137 4934 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 Y_RNA.315-201ENST00000365117 102 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RNU6-606P-201ENST00000384721 111 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 NHP2P2-201ENST00000396362 460 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL592293.2-201ENST00000422292 996 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC018644.1-201ENST00000429934 551 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC236972.2-201ENST00000434979 310 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 IFNA20P-201ENST00000436840 528 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms