Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC055839.1-201ENST00000634467 498 ntBASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL3Q8IVW4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC093719.1-202ENST00000392735 373 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 RN7SKP216-201ENST00000411050 312 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 SMC4P1-201ENST00000414479 527 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC244033.1-201ENST00000426826 870 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 RPL36AP15-201ENST00000444514 266 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 VN1R96P-201ENST00000446052 858 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 RPL23AP43-201ENST00000446445 471 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AP002371.1-201ENST00000463604 433 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 RPL12P20-201ENST00000475538 479 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC093270.2-201ENST00000486157 792 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC231760.1-201ENST00000498002 260 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AL160290.3-201ENST00000604869 165 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 Z98200.1-201ENST00000607298 470 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 FAM25E-202ENST00000608562 189 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC004948.1-201ENST00000609858 672 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC074029.4-201ENST00000624796 1859 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC006065.6-201ENST00000625201 545 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 AC017104.4-201ENST00000636283 1592 ntBASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CDKL3Q8IVW4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CDKL3Q8IVW4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.59□□□□□ -1.68
CDKL3Q8IVW4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC011155.1-201ENST00000316512 456 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 MIR659-201ENST00000384963 97 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 GAPDHP49-201ENST00000421421 961 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 ARAFP1-201ENST00000422172 605 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC006455.6-201ENST00000426192 893 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 NPM1P26-201ENST00000426339 738 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 MTCO1P51-201ENST00000427672 1060 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AL162591.2-201ENST00000449634 317 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 RPS27AP17-201ENST00000463344 455 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 NDUFA5P12-201ENST00000503796 343 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 OR5D15P-201ENST00000531671 942 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC008147.3-201ENST00000548666 354 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 RPL23AP97-201ENST00000568955 471 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 RN7SL690P-201ENST00000582087 240 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AL133243.1-201ENST00000614487 366 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC244517.3-201ENST00000616254 1235 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 OR2L1P-202ENST00000641567 1023 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AL596275.2-204ENST00000641628 552 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 AL596275.2-206ENST00000641957 626 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CDKL3Q8IVW4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC073429.2-201ENST00000569694 1444 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 MIR365B-201ENST00000362317 111 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RNU6-984P-201ENST00000363236 109 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 MIR550A3-201ENST00000390735 95 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AL049697.2-201ENST00000403708 294 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RNU2-50P-201ENST00000410494 143 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RPS26P47-201ENST00000427219 348 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC073335.1-201ENST00000427776 363 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AL360081.1-201ENST00000428299 555 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms