Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 RN7SKP104-201ENST00000362605 328 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 RNA5SP123-201ENST00000363244 119 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL390316.1-201ENST00000406279 553 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 LIPT1P1-201ENST00000415870 1186 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 RPS26P13-201ENST00000419030 330 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 OR2X1P-201ENST00000421144 687 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL590762.4-201ENST00000425885 253 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 NDUFA5P10-201ENST00000432147 357 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 RPL34P20-201ENST00000442771 351 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 VN1R25P-201ENST00000443385 738 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 OR7E125P-201ENST00000443450 846 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 CYCSP24-201ENST00000445119 316 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 BTF3P6-201ENST00000448054 499 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 EDDM3DP-201ENST00000554692 434 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 MTCYBP27-201ENST00000555160 670 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 OR1F2P-201ENST00000570470 933 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 MIR4789-201ENST00000577469 82 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC013444.2-201ENST00000603317 787 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC005084.1-201ENST00000605160 304 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AL049539.1-201ENST00000611964 459 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC021755.4-201ENST00000616620 456 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC105105.5-201ENST00000622635 1294 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC104985.3-201ENST00000623479 597 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AP003485.2-201ENST00000623636 610 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC073869.7-201ENST00000640874 297 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 AC132825.1-201ENST00000463573 2247 ntBASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VSTM1Q6UX27 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AC005005.4-201ENST00000623789 16698 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 RNA5SP428-201ENST00000365129 132 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 UBBP2-201ENST00000376781 231 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 SNORA2.3-201ENST00000383920 135 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 HMGB1P10-201ENST00000395823 563 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AL096803.2-201ENST00000450032 677 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 CYCSP42-201ENST00000450823 238 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 HMGB1P5-202ENST00000451497 985 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 VN1R40P-201ENST00000455196 941 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 NAP1L1P3-201ENST00000462291 880 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AC082651.2-201ENST00000496833 166 ntBASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.36□□□□□ -1.55
VSTM1Q6UX27 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms