Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PGBD4P4-201ENST00000509673 613 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC135507.2-201ENST00000612443 309 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL442067.2-201ENST00000614033 363 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC016957.2-201ENST00000616998 848 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL445363.3-201ENST00000623080 671 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 EIF3EP2-201ENST00000423042 1814 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 PDSS1P2-201ENST00000449397 678 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AL139099.1-201ENST00000497398 403 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AP001357.1-201ENST00000586304 1053 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AP001157.1-201ENST00000550837 2339 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AL031595.2-201ENST00000624215 19071 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AP001486.1-201ENST00000463339 476 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AC098799.3-201ENST00000506095 438 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AC024224.1-201ENST00000538284 609 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 AC023762.1-201ENST00000603280 584 ntBASIC4.26□□□□□ -1.73
RIF1Q5UIP0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIF1Q5UIP0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 RAD17P2-201ENST00000451754 1977 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 ARAFP1-201ENST00000422172 605 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 OR8F1P-201ENST00000425243 930 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 AL157831.1-201ENST00000426134 473 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 AC097486.1-201ENST00000515331 210 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 DUX4L52-201ENST00000549363 777 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 MIR6500-201ENST00000622700 86 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 AL133243.3-201ENST00000617415 3004 ntBASIC4.25□□□□□ -1.73
RIF1Q5UIP0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIF1Q5UIP0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 AC004944.1-201ENST00000517807 3059 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIF1Q5UIP0 AL139095.1-201ENST00000404326 391 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 VN1R37P-201ENST00000419096 748 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 OR9M1P-201ENST00000459641 921 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 RNU1-95P-201ENST00000516357 160 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 RNU1-128P-201ENST00000516704 160 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 OR8I1P-201ENST00000529291 931 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 MIR7853-201ENST00000584820 132 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 AC090181.2-201ENST00000602975 672 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 ELOCP35-201ENST00000604289 336 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 AC025175.1-201ENST00000606482 759 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 MIR7151-201ENST00000617477 60 ntBASIC4.24□□□□□ -1.73
RIF1Q5UIP0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms