Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL31P15-201ENST00000449770 338 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL606490.1-201ENST00000452266 765 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 DUXAP8-207ENST00000456786 622 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC098799.3-201ENST00000506095 438 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC008837.1-201ENST00000511513 412 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC022884.2-201ENST00000578535 580 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 MIR1273E-201ENST00000581165 102 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 FO393422.1-201ENST00000603908 708 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC009948.4-201ENST00000604692 675 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC096553.1-201ENST00000605169 829 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 DUXAP10-204ENST00000612052 616 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC127024.6-201ENST00000621598 424 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 BX649567.1-201ENST00000642071 1134 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC092162.3-201ENST00000624511 1624 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC38Q502W7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 RNA5SP234-201ENST00000363916 119 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 MCTS2P-201ENST00000394552 546 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 OR4K12P-201ENST00000406538 961 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 Z93019.1-201ENST00000416450 973 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 TAF13P2-201ENST00000416876 286 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC234782.4-201ENST00000417646 1048 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC114814.2-201ENST00000419195 485 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 MTCO2P23-201ENST00000425216 680 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC114973.1-201ENST00000429057 632 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC012075.1-201ENST00000436549 580 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 PTGES3P1-201ENST00000439531 483 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 MTCO1P53-201ENST00000441633 699 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 RRM2P4-201ENST00000441721 562 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 RPS26P30-201ENST00000443431 335 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 CYCSP24-201ENST00000445119 316 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AL031584.1-201ENST00000447169 754 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 ARL4AP1-201ENST00000503220 705 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 RN7SKP46-201ENST00000515942 234 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 RNA5SP228-201ENST00000516232 133 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AP001207.2-201ENST00000519490 539 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 OR7E13P-201ENST00000526052 910 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 NDUFS5P6-201ENST00000529136 295 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC022882.1-201ENST00000532142 501 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC027544.3-201ENST00000535082 757 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 MIR3614-201ENST00000581261 86 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC38Q502W7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC38Q502W7 PHKBP1-201ENST00000450951 1951 ntBASIC5.43□□□□□ -1.54
CCDC38Q502W7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC38Q502W7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC38Q502W7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC38Q502W7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC38Q502W7 MAPK10-320ENST00000641462 6696 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL118496.1-201ENST00000440201 1812 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC38Q502W7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms